6XWE
Crystal structure of LYK3 ectodomain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LysM_1 | e6xweA2 | A: alpha arrays | X: HTH | H: LysM domain (From Topology) | T: LysM domain | F: LysM_1 | ECOD (1.6) |
A | LysM_5 | e6xweA1 | A: alpha arrays | X: HTH | H: LysM domain (From Topology) | T: LysM domain | F: LysM_5 | ECOD (1.6) |
A | UNK_F_TYPE | e6xweA3 | A: alpha arrays | X: HTH | H: LysM domain (From Topology) | T: LysM domain | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01476 | LysM domain (LysM) | LysM domain | The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR000719 | Protein kinase domain | Domain | |
IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain | |
IPR018392 | LysM domain | Domain | |
IPR044812 | LysM domain receptor kinase CERK1/LYK3-like | Family | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |