Structure of a human ABCE1-bound 43S pre-initiation complex - State II
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B [auth p] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053212 | 3002166 | SCOP2B (2022-06-29) |
| G [auth r] | SCOP2B Superfamily | GS N-terminal domain-like | 8053171 | 3000408 | SCOP2B (2022-06-29) |
| I [auth t] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053077 | 3000433 | SCOP2B (2022-06-29) |
| K [auth n] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052715 | 3002138 | SCOP2B (2022-06-29) |
| K [auth n] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052717 | 3000135 | SCOP2B (2022-06-29) |
| L [auth m] | SCOP2B Superfamily | Homeodomain-like | 8052958 | 3000001 | SCOP2B (2022-06-29) |
| L [auth m] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052959 | 3001284 | SCOP2B (2022-06-29) |
| O [auth f] | SCOP2B Superfamily | Ribosomal protein S8 | 8095469 | 3000709 | SCOP2B (2022-06-29) |
| S [auth T] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053453 | 3002190 | SCOP2B (2022-06-29) |
| V [auth g] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082685 | 3000100 | SCOP2B (2022-06-29) |
| Z [auth v] | SCOP2B Superfamily | L30e-like | 8063978 | 3001739 | SCOP2B (2022-06-29) |
| BA [auth k] | SCOP2B Superfamily | S13-like H2TH domain | 8101555 | 3000053 | SCOP2B (2022-06-29) |
| CA [auth x] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8089318 | 3000034 | SCOP2B (2022-06-29) |
| DA [auth h] | SCOP2B Superfamily | Ribosomal protein S10 | 8098806 | 3001336 | SCOP2B (2022-06-29) |
| EA [auth P] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090992 | 3000034 | SCOP2B (2022-06-29) |
| FA [auth S] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8063426 | 3000135 | SCOP2B (2022-06-29) |
| GA [auth l] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052572 | 3000068 | SCOP2B (2022-06-29) |
| OA [auth F] | SCOP2B Superfamily | JAB1/MPN domain-like | 8053242 | 3001105 | SCOP2B (2022-06-29) |
| OA [auth F] | SCOP2B Superfamily | EIF3 subunit F C-terminal domain-like | 8053241 | 3002167 | SCOP2B (2022-06-29) |
| QA [auth K] | SCOP2B Superfamily | ARM repeat-like | 8002866 | 3000116 | SCOP2B (2022-06-29) |
| QA [auth K] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8002864 | 3000034 | SCOP2B (2022-06-29) |
| UA [auth N] | SCOP2B Superfamily | eIF1-like | 8035729 | 3001441 | SCOP2B (2022-06-29) |
| E [auth q] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052756 | 3000135 | SCOP2B (2022-06-29) |
| E [auth q] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052757 | 3000334 | SCOP2B (2022-06-29) |
| E [auth q] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052755 | 3001473 | SCOP2B (2022-06-29) |
| PA [auth H] | SCOP2B Superfamily | JAB1/MPN domain-like | 8053284 | 3001105 | SCOP2B (2022-06-29) |
| NA [auth E] | SCOP2B Superfamily | TPR-like | 8091483 | 3001345 | SCOP2B (2022-06-29) |
| NA [auth E] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8091486 | 3000034 | SCOP2B (2022-06-29) |
| D [auth Q] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053143 | 3000068 | SCOP2B (2022-06-29) |
| KA [auth B] | SCOP2B Superfamily | RNA-binding domain, RBD | 8073934 | 3000110 | SCOP2B (2022-06-29) |
| Y [auth u] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055714 | 3000034 | SCOP2B (2022-06-29) |
| X [auth e] | SCOP2B Superfamily | Ribosomal protein S7 | 8066003 | 3000799 | SCOP2B (2022-06-29) |
| W [auth b] | SCOP2B Superfamily | Prokaryotic type KH domain (KH-domain type II) | 8043545 | 3001043 | SCOP2B (2022-06-29) |
| N [auth y] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053139 | 3000068 | SCOP2B (2022-06-29) |
| M [auth i] | SCOP2 Family | Ribosomal protein L18p and S11 | 8096689 | 4000555 | SCOP2 (2022-06-29) |
| M [auth i] | SCOP2 Superfamily | Translational machinery components | 8096690 | 3000571 | SCOP2 (2022-06-29) |
| A [auth a] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8052791 | 3001397 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth p] | e6zvjp1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| G [auth r] | e6zvjr1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| H [auth s] | e6zvjs1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| I [auth t] | e6zvjt1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| J [auth c] | e6zvjc1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| K [auth n] | e6zvjn1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| L [auth m] | e6zvjm1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| O [auth f] | e6zvjf1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| P [auth j] | e6zvjj1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| S [auth T] | e6zvjT1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| V [auth g] | e6zvjg1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| Z [auth v] | e6zvjv1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| AA [auth o] | e6zvjo1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| BA [auth k] | e6zvjk1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| CA [auth x] | e6zvjx1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| DA [auth h] | e6zvjh1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| EA [auth P] | e6zvjP1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| FA [auth S] | e6zvjS1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| GA [auth l] | e6zvjl1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| HA [auth U] | e6zvjU1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| IA [auth V] | e6zvjV1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| JA [auth I] | e6zvjI1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| LA [auth A] | e6zvjA01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| MA [auth C] | e6zvjC01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| OA [auth F] | e6zvjF1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| QA [auth K] | e6zvjK1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| RA [auth L] | e6zvjL01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| UA [auth N] | e6zvjN1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| VA [auth D] | e6zvjD01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| XA [auth G] | e6zvjG1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| YA [auth J] | e6zvjJ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| F [auth W] | e6zvjW1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| E [auth q] | e6zvjq1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| TA [auth 1] | e6zvj11 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| SA [auth M] | e6zvjM01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| PA [auth H] | e6zvjH1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| NA [auth E] | e6zvjE1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: PDZ_2 | F: | ECOD (20:10:01) | |
| D [auth Q] | e6zvjQ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| KA [auth B] | e6zvjB01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| C [auth d] | e6zvjd1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| Y [auth u] | e6zvju1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| X [auth e] | e6zvje1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| W [auth b] | e6zvjb1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| U [auth w] | e6zvjw1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| R | e6zvjR1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| Q [auth z] | e6zvjz1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| N [auth y] | e6zvjy1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| M [auth i] | e6zvji1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) | |
| A [auth a] | e6zvja1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: VWD | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| S [auth T] | PF04758 | Ribosomal protein S30 (Ribosomal_S30) | Ribosomal protein S30 | - | Family |
| EA [auth P] | PF03297 | S25 ribosomal protein (Ribosomal_S25) | S25 ribosomal protein | - | Family |
| FA [auth S] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| FA [auth S] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| HA [auth U] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| IA [auth V] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| IA [auth V] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| JA [auth I] | PF24805 | EIF3I (EIF3I) | EIF3I | - | Repeat |
| JA [auth I] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| LA [auth A] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| LA [auth A] | PF22591 | eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like) | eIF3a, PCI domain, TPR-like region | - | Repeat |
| LA [auth A] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
| MA [auth C] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| MA [auth C] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| OA [auth F] | PF13012 | Maintenance of mitochondrial structure and function (MitMem_reg) | Maintenance of mitochondrial structure and function | - | Family |
| OA [auth F] | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ... | Domain |
| QA [auth K] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| QA [auth K] | PF10075 | CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K) | CSN8/PSMD8/EIF3K family | - | Family |
| RA [auth L] | PF10255 | RNA polymerase I-associated factor PAF67 (Paf67) | RNA polymerase I-associated factor PAF67 | - | Repeat |
| UA [auth N] | PF01253 | Translation initiation factor SUI1 (SUI1) | Translation initiation factor SUI1 | Domain | |
| UA [auth N] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| VA [auth D] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| VA [auth D] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| VA [auth D] | PF05091 | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (eIF-3_zeta) | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | - | Family |
| WA [auth Y] | PF01249 | Ribosomal protein S21e (Ribosomal_S21e) | Ribosomal protein S21e | - | Family |
| XA [auth G], YA [auth J] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| XA [auth G], YA [auth J] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| F [auth W] | PF05162 | Ribosomal protein L41 (Ribosomal_L41) | Ribosomal protein L41 | - | Family |
| F [auth W] | PF00833 | Ribosomal S17 (Ribosomal_S17e) | Ribosomal S17 | - | Family |
| TA [auth 1] | PF04068 | Possible Fer4-like domain in RNase L inhibitor, RLI (Fer4_RLI) | Possible Fer4-like domain in RNase L inhibitor, RLI | - | Family |
| TA [auth 1] | PF00037 | 4Fe-4S binding domain (Fer4) | 4Fe-4S binding domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. | Domain |
| TA [auth 1] | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
| SA [auth M] | PF18005 | eIF3 subunit M, C-terminal helix (eIF3m_C_helix) | eIF3 subunit M, C-terminal helix | This is the C-terminal helix domain found in Eukaryotic translation initiation factor 3 subunit M (eIF3m). In mammalian eIF3a, the C-terminal helix following the PCI domain is involved in interactions with other core subunits [1]. | Domain |
| SA [auth M] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
| SA [auth M] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| PA [auth H] | PF19445 | C-terminal region of eIF3h (eIF3h_C) | C-terminal region of eIF3h | - | Family |
| PA [auth H] | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ... | Domain |
| NA [auth E] | PF09440 | eIF3 subunit 6 N terminal domain (eIF3_N) | eIF3 subunit 6 N terminal domain | This is the N terminal domain of subunit 6 translation initiation factor eIF3. | Domain |
| NA [auth E] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| NA [auth E] | PF21357 | Eukaryotic translation initiation factor 3 subunit E, C-terminal (EIF3E_C) | Eukaryotic translation initiation factor 3 subunit E, C-terminal | Eukaryotic translation initiation factor 3 subunit E (EIF3E) is a component of the EIF3 complex, involved in protein synthesis. This is the C-terminal helical tail of EIF3E [1]. | Domain |
| NA [auth E] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
| D [auth Q] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| D [auth Q] | PF01283 | Ribosomal protein S26e (Ribosomal_S26e) | Ribosomal protein S26e | - | Family |
| D [auth Q] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
| KA [auth B] | PF08662 | Eukaryotic translation initiation factor eIF2A (eIF2A) | Eukaryotic translation initiation factor eIF2A | - | Repeat |
| KA [auth B] | PF00076 | RNA recognition motif (RRM_1) | RNA recognition motif | The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ... | Domain |
| PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family | |
| PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family | |














