6ZVR | pdb_00006zvr

C11 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth AB]	MIF4G	e6zvrAB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Z [auth AA]	MIF4G	e6zvrAA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
YA [auth ZA]	MIF4G	e6zvrZA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Y [auth Z]	Glyco_transf_41	e6zvrZ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
XA [auth YA]	Glyco_transf_41	e6zvrYA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
X [auth Y]	MIF4G	e6zvrY1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
WA [auth XA]	MIF4G	e6zvrXA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
W [auth X]	MIF4G	e6zvrX1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
VA [auth WA]	MIF4G	e6zvrWA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
V [auth W]	MIF4G	e6zvrW1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
UA [auth VA]	MIF4G	e6zvrVA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
U [auth V]	MIF4G	e6zvrV1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
TA [auth UA]	MIF4G	e6zvrUA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
T	Glyco_transf_41	e6zvrT1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
SA [auth TA]	Glyco_transf_41	e6zvrTA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
S	MIF4G	e6zvrS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
RA [auth SA]	MIF4G	e6zvrSA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
R	MIF4G	e6zvrR1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
QA [auth RA]	MIF4G	e6zvrRA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Q	MIF4G	e6zvrQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
PA [auth QA]	MIF4G	e6zvrQA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
P	MIF4G	e6zvrP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
OA [auth PA]	MIF4G	e6zvrPA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
O	Glyco_transf_41	e6zvrO1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
NA [auth OA]	Glyco_transf_41	e6zvrOA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
N	MIF4G	e6zvrN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
MA [auth NA]	MIF4G	e6zvrNA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
M	MIF4G	e6zvrM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
LA [auth MA]	MIF4G	e6zvrMA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
L	MIF4G	e6zvrL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
KA [auth LA]	MIF4G	e6zvrLA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
K	MIF4G	e6zvrK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
JA [auth KA]	MIF4G	e6zvrKA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
J	Glyco_transf_41	e6zvrJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
IA [auth JA]	Glyco_transf_41	e6zvrJA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
I	MIF4G	e6zvrI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
HA [auth IA]	MIF4G	e6zvrIA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
H	MIF4G	e6zvrH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
GA [auth HA]	MIF4G	e6zvrHA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
G	MIF4G	e6zvrG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
FA [auth GA]	MIF4G	e6zvrGA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F [auth A]	MIF4G	e6zvrA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
EA [auth FA]	MIF4G	e6zvrFA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E [auth F]	Glyco_transf_41	e6zvrF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
DA [auth EA]	Glyco_transf_41	e6zvrEA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
D [auth E]	MIF4G	e6zvrE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
CB [auth DB]	Glyco_transf_41	e6zvrDB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
CA [auth DA]	MIF4G	e6zvrDA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
C [auth D]	MIF4G	e6zvrD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
BB [auth CB]	MIF4G	e6zvrCB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
BA [auth CA]	MIF4G	e6zvrCA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
B [auth C]	MIF4G	e6zvrC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
AB [auth BB]	MIF4G	e6zvrBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
AA [auth BA]	MIF4G	e6zvrBA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
A [auth B]	MIF4G	e6zvrB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], BB [auth CB], C [auth D], CA [auth DA], CB [auth DB], D [auth E], DA [auth EA], E [auth F], EA [auth FA], F [auth A], FA [auth GA], G, GA [auth HA], H, HA [auth IA], I, IA [auth JA], J, JA [auth KA], K, KA [auth LA], L, LA [auth MA], M, MA [auth NA], N, NA [auth OA], O, OA [auth PA], P, PA [auth QA], Q, QA [auth RA], R, RA [auth SA], S, SA [auth TA], T, TA [auth UA], U [auth V], UA [auth VA], V [auth W], VA [auth WA], W [auth X], WA [auth XA], X [auth Y], XA [auth YA], Y [auth Z], YA [auth ZA], Z [auth AA], ZA [auth AB]	PF04012	PspA/IM30 family (PspA_IM30)	PspA/IM30 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], BB [auth CB], C [auth D], CA [auth DA], CB [auth DB], D [auth E], DA [auth EA], E [auth F], EA [auth FA], F [auth A], FA [auth GA], G, GA [auth HA], H, HA [auth IA], I, IA [auth JA], J, JA [auth KA], K, KA [auth LA], L, LA [auth MA], M, MA [auth NA], N, NA [auth OA], O, OA [auth PA], P, PA [auth QA], Q, QA [auth RA], R, RA [auth SA], S, SA [auth TA], T, TA [auth UA], U [auth V], UA [auth VA], V [auth W], VA [auth WA], W [auth X], WA [auth XA], X [auth Y], XA [auth YA], Y [auth Z], YA [auth ZA], Z [auth AA], ZA [auth AB]	Vipp1	binding lipid binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], A [auth B], AA [auth BA], AB [auth BB], B [auth C], BA [auth CA], BB [auth CB], C [auth D], CA [auth DA], CB [auth DB], D [auth E], DA [auth EA], E [auth F], EA [auth FA], F [auth A], FA [auth GA], G, GA [auth HA], H, HA [auth IA], I, IA [auth JA], J, JA [auth KA], K, KA [auth LA], L, LA [auth MA], M, MA [auth NA], N, NA [auth OA], O, OA [auth PA], P, PA [auth QA], Q, QA [auth RA], R, RA [auth SA], S, SA [auth TA], T, TA [auth UA], U [auth V], UA [auth VA], V [auth W], VA [auth WA], W [auth X], WA [auth XA], X [auth Y], XA [auth YA], Y [auth Z], YA [auth ZA], Z [auth AA], ZA [auth AB]	IPR007157	PspA/VIPP1	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.