High-resolution cryo-EM structure of the human 80S ribosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| P [auth LN] | SCOP2 Family | L15e | 8098811 | 4000945 | SCOP2 (2022-06-29) |
| P [auth LN] | SCOP2 Superfamily | Ribosomal proteins S24e, L23 and L15e | 8098812 | 3000210 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth LB] | ArsC | e6qzpLB1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| F [auth LC] | Lactamase_B | e6qzpLC1 | A: alpha arrays | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Lactamase_B | ECOD (v295) |
| G [auth LD] | ArsC | e6qzpLD1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| H [auth LE] | ArsC | e6qzpLE1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| I [auth LF] | ArsC | e6qzpLF1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| J [auth LG] | ArsC | e6qzpLG1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| M [auth LJ] | ArsC | e6qzpLJ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| O [auth LM] | ArsC | e6qzpLM1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| Q [auth LO] | ArsC | e6qzpLO1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| S [auth LQ] | ArsC | e6qzpLQ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| T [auth LR] | ArsC | e6qzpLR1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| V [auth LT] | ArsC | e6qzpLT1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| W [auth LU] | ArsC | e6qzpLU1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| Y [auth LW] | ArsC | e6qzpLW1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| Z [auth LX] | ArsC | e6qzpLX1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| BA [auth LZ] | ArsC | e6qzpLZ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| FA [auth Ld] | ArsC | e6qzpLd1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| HA [auth Lf] | ArsC | e6qzpLf1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| IA [auth Lg] | ArsC | e6qzpLg1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| JA [auth Lh] | ArsC | e6qzpLh1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| LA [auth Lj] | ArsC | e6qzpLj1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| MA [auth Lk] | ArsC | e6qzpLk1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| NA [auth Ll] | ArsC | e6qzpLl1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| OA [auth Lm] | ArsC | e6qzpLm1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| QA [auth Lo] | ArsC | e6qzpLo1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| RA [auth Lp] | ArsC | e6qzpLp1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| SA [auth Lr] | ArsC | e6qzpLr1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| TA [auth Lz] | ArsC | e6qzpLz1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| WA [auth SA] | ArsC | e6qzpSA1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| YA [auth SD] | ArsC | e6qzpSD1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| ZA [auth SE] | ArsC | e6qzpSE1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| AB [auth SF] | ArsC | e6qzpSF1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| CB [auth SI] | ArsC | e6qzpSI1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| DB [auth SK] | ArsC | e6qzpSK1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| FB [auth SP] | ArsC | e6qzpSP1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| GB [auth SQ] | ArsC | e6qzpSQ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| JB [auth ST] | ArsC | e6qzpST1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| NB [auth Sa] | ArsC | e6qzpSa1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| OB [auth Sc] | ArsC | e6qzpSc1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| PB [auth Sd] | ArsC | e6qzpSd1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| SB [auth SG] | ArsC | e6qzpSG1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| TB [auth SJ] | ArsC | e6qzpSJ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| UB [auth SM] | ArsC | e6qzpSM1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| WB [auth SO] | ArsC | e6qzpSO1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| XB [auth SW] | ArsC | e6qzpSW1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| YB [auth SY] | ArsC | e6qzpSY1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| AC [auth Sb] | ArsC | e6qzpSb1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| BC [auth Se] | ArsC | e6qzpSe1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| CC [auth Sf] | ArsC | e6qzpSf1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| ZB [auth SZ] | ArsC | e6qzpSZ1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| VB [auth SN] | ArsC | e6qzpSN1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| RB [auth SC] | ArsC | e6qzpSC1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| QB [auth Sg] | ArsC | e6qzpSg1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| MB [auth SX] | ArsC | e6qzpSX1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| LB [auth SV] | ArsC | e6qzpSV1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| KB [auth SU] | ArsC | e6qzpSU1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| IB [auth SS] | ArsC | e6qzpSS1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| HB [auth SR] | ArsC | e6qzpSR1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| EB [auth SL] | ArsC | e6qzpSL1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| BB [auth SH] | ArsC | e6qzpSH1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| XA [auth SB] | ArsC | e6qzpSB1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| PA [auth Ln] | ArsC | e6qzpLn1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| D [auth LA] | ArsC | e6qzpLA1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| KA [auth Li] | ArsC | e6qzpLi1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| GA [auth Le] | ArsC | e6qzpLe1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| EA [auth Lc] | ArsC | e6qzpLc1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| DA [auth Lb] | ArsC | e6qzpLb1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| CA [auth La] | ArsC | e6qzpLa1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| AA [auth LY] | ArsC | e6qzpLY1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| X [auth LV] | ArsC | e6qzpLV1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| U [auth LS] | ArsC | e6qzpLS1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| R [auth LP] | ArsC | e6qzpLP1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| P [auth LN] | ArsC | e6qzpLN1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| N [auth LL] | ArsC | e6qzpLL1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| L [auth LI] | ArsC | e6qzpLI1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
| K [auth LH] | ArsC | e6qzpLH1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: ArsC | ECOD (v295) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| A [auth L5] | 1MA | Parent Component: A |
| A [auth L5] | 2MG | Parent Component: G |
| A [auth L5] | 5MC | Parent Component: C |
| A [auth L5] | 5MU | Parent Component: U |
| A [auth L5] | 6MZ | Parent Component: A |
| A [auth L5] | A2M | Parent Component: A |
| A [auth L5] | B8H | Parent Component: U |
| A [auth L5] | B8T | Parent Component: C |
| A [auth L5] | JMH | Parent Component: C |
| A [auth L5] | OMC | Parent Component: C |
| A [auth L5] | OMG | Parent Component: G |
| A [auth L5] | OMU | Parent Component: U |
| A [auth L5] | PSU | Parent Component: U |
| A [auth L5] | UR3 | Parent Component: U |
| C [auth L8] | OMU | Parent Component: U |
| F [auth LC] | MLZ | Parent Component: LYS :  AA0076 :  N6-methyl-L-lysine MOD:00085 |
| OA [auth Lm] | MLZ | Parent Component: LYS :  AA0076 , AA0076 :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085 |
| UA [auth S2] | 4AC | Parent Component: C :  AA0076 , AA0076 |
| UA [auth S2] | 5MC | Parent Component: C :  AA0076 , AA0076 |
| UA [auth S2] | 5MU | Parent Component: U :  AA0076 , AA0076 |
| UA [auth S2] | 6MZ | Parent Component: A :  AA0076 , AA0076 |
| UA [auth S2] | A2M | Parent Component: A :  AA0076 , AA0076 |
| UA [auth S2] | B8N | :  AA0076 , AA0076 |
| UA [auth S2] | JMH | Parent Component: C |
| UA [auth S2] | M7A | Parent Component: A :  AA0076 , AA0076 |
| UA [auth S2] | MA6 | Parent Component: A :  AA0076 , AA0076 |
| UA [auth S2] | OMC | Parent Component: C :  AA0076 , AA0076 |
| UA [auth S2] | OMG | Parent Component: G :  AA0076 , AA0076 |
| UA [auth S2] | OMU | Parent Component: U :  AA0076 , AA0076 |
| UA [auth S2] | PSU | Parent Component: U :  AA0076 , AA0076 |
| UA [auth S2] | UR3 | Parent Component: U :  AA0076 , AA0076 |














