6S5W
Structure of Rib domain 'Rib Long' from Lactobacillus acidophilus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e6s5wA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e6s5wB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18957 | Long Rib domain (RibLong) | Long Rib domain | This entry represents the Long Rib domain that is closely related to the Pfam:PF08428 Rib domain but has a conserved insertion. These domains are found in bacterial cell surface proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Surface protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR046776 | Putative pectate lyase-like adhesive domain | Repeat | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR044055 | Long Rib domain | Domain | |
IPR012706 | Rib/alpha/Esp surface antigen repeat | Repeat |