7CDZ
Crystal structure of 2019-nCoV nucleocapsid N-terminal domain (NTD) protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SARS coronavirus nucleoprotein RNA-binding domain-like | 8092433 | 3000498 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SARS coronavirus nucleoprotein RNA-binding domain-like | 8092433 | 3000498 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SARS coronavirus nucleoprotein RNA-binding domain-like | 8092433 | 3000498 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SARS coronavirus nucleoprotein RNA-binding domain-like | 8092433 | 3000498 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Corona_nucleoca_1st | e7cdzA1 | A: beta complex topology | X: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | H: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | T: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) | F: Corona_nucleoca_1st | ECOD (1.6) |
B | Corona_nucleoca_1st | e7cdzB1 | A: beta complex topology | X: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | H: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | T: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) | F: Corona_nucleoca_1st | ECOD (1.6) |
C | Corona_nucleoca_1st | e7cdzC1 | A: beta complex topology | X: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | H: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | T: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) | F: Corona_nucleoca_1st | ECOD (1.6) |
D | Corona_nucleoca_1st | e7cdzD1 | A: beta complex topology | X: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | H: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) (From Topology) | T: Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) | F: Corona_nucleoca_1st | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR044344 | Nucleocapsid (N) protein, C-terminal domain, coronavirus | Domain | |
IPR043505 | Nucleocapsid protein, betacoronavirus | Family | |
IPR001218 | Nucleocapsid protein, coronavirus | Family | |
IPR037195 | Nucleocapsid protein, N-terminal | Homologous Superfamily | |
IPR037179 | Nucleocapsid protein, C-terminal | Homologous Superfamily | |
IPR044345 | Nucleocapsid (N) protein, N-terminal domain, coronavirus | Domain |