Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRap30/74 heterodimerisation domain-like 8054050 3000142 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilyCore histone-like 8042408 3001387 SCOP2B (2022-06-29)
W [auth l]SCOP2B SuperfamilyCore histone-like 8042408 3001387 SCOP2B (2022-06-29)
K [auth O]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), beta-barrel domain 8037007 3001281 SCOP2B (2022-06-29)
K [auth O]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), alpha-helical domain 8037005 3001887 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyTATA-box binding protein-like 8036293 3000705 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyTATA-box binding protein-like 8036295 3000705 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), beta-barrel domain 8037002 3001281 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), alpha-helical domain 8037001 3001887 SCOP2B (2022-06-29)
P [auth c]SCOP2B SuperfamilyCore histone-like 8086844 3001387 SCOP2B (2022-06-29)
V [auth k]SCOP2B SuperfamilyCore histone-like 8036824 3001387 SCOP2B (2022-06-29)
X [auth m]SCOP2B SuperfamilyCore histone-like 8036818 3001387 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyCore histone-like 8042407 3001387 SCOP2B (2022-06-29)
Q [auth d]SCOP2B SuperfamilyCore histone-like 8042407 3001387 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyTaf5 N-terminal domain-like 8034920 3001495 SCOP2B (2022-06-29)
R [auth e]SCOP2B SuperfamilyTaf5 N-terminal domain-like 8034920 3001495 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyCore histone-like 8081687 3001387 SCOP2B (2022-06-29)
S [auth f]SCOP2B SuperfamilyCore histone-like 8081687 3001387 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyRap30/74 heterodimerisation domain-like 8054049 3000142 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyCore histone-like 8053232 3001387 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyCore histone-like 8053233 3001387 SCOP2B (2022-06-29)
U [auth j]SCOP2B SuperfamilyCore histone-like 8053233 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L]TFIID_20kDae7egdL1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_20kDaECOD (1.6)
K [auth O]TFIIA_gamma_Ce7egdO2 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_gamma_CECOD (1.6)
K [auth O]TFIIA_gamma_Ne7egdO1 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_gamma_NECOD (1.6)
L [auth P]TBPe7egdP1 A: a+b two layersX: TBP-likeH: TATA-box binding protein-like (From Topology)T: TATA-box binding protein-likeF: TBPECOD (1.6)
M [auth Q]TFIIA_Ce7egdQ2 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_CECOD (1.6)
M [auth Q]TFIIA_Ne7egdQ1 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_NECOD (1.6)
V [auth k]TAFII28e7egdk1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TAFII28ECOD (1.6)
BPeptidase_M1_2e7egdB1 A: beta sandwichesX: Baculovirus p35 protein-related (From Topology)H: Baculovirus p35 protein-related (From Topology)T: Baculovirus p35 protein-relatedF: Peptidase_M1_2ECOD (1.6)
BCLASP_N_2e7egdB3 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: CLASP_N_2ECOD (1.6)
BPeptidase_M1e7egdB2 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: Peptidase_M1ECOD (1.6)
D [auth E]ANAPC4_WD40_10e7egdE2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_10ECOD (1.6)
D [auth E]TFIID_NTD2e7egdE1 A: alpha superhelicesX: Taf5 N-terminal domain-like (From Topology)H: Taf5 N-terminal domain-like (From Topology)T: Taf5 N-terminal domain-likeF: TFIID_NTD2ECOD (1.6)
R [auth e]ANAPC4_WD40_10e7egde2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_10ECOD (1.6)
R [auth e]TFIID_NTD2e7egde1 A: alpha superhelicesX: Taf5 N-terminal domain-like (From Topology)H: Taf5 N-terminal domain-like (From Topology)T: Taf5 N-terminal domain-likeF: TFIID_NTD2ECOD (1.6)
I [auth J]TFIID_30kDae7egdJ1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_30kDaECOD (1.6)
U [auth j]TFIID_30kDae7egdj1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_30kDaECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF12157Protein of unknown function (DUF3591) (DUF3591)Protein of unknown function (DUF3591)- Family
J [auth L],
W [auth l]
PF03847Transcription initiation factor TFIID subunit A (TFIID_20kDa)Transcription initiation factor TFIID subunit ADomain
K [auth O]PF02751Transcription initiation factor IIA, gamma subunit (TFIIA_gamma_C)Transcription initiation factor IIA, gamma subunitAccurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA b ...Domain
L [auth P]PF00352Transcription factor TFIID (or TATA-binding protein, TBP) (TBP)Transcription factor TFIID (or TATA-binding protein, TBP)Domain
M [auth Q]PF03153Transcription factor IIA, alpha/beta subunit (TFIIA)Transcription factor IIA, alpha/beta subunit- Family
D [auth E],
R [auth e]
PF04494WD40 associated region in TFIID subunit, NTD2 domain (TFIID_NTD2)WD40 associated region in TFIID subunit, NTD2 domain- Family
D [auth E],
R [auth e]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
E [auth F],
S [auth f]
PF07571TAF6 C-terminal HEAT repeat domain (TAF6_C)TAF6 C-terminal HEAT repeat domain- Repeat
E [auth F],
S [auth f]
PF02969TATA box binding protein associated factor (TAF) (TAF)TATA box binding protein associated factor (TAF)TAF proteins adopt a histone-like fold. Domain
F [auth G]PF04658TAFII55 protein conserved region (TAFII55_N)TAFII55 protein conserved region- Family
G [auth H]PF07524Bromodomain associated (Bromo_TP)Bromodomain associatedThis domain is predicted to bind DNA [1] and is often found associated with Pfam:PF00439 and in transcription factors. It has a histone-like fold. Domain
G [auth H]PF10406Transcription factor TFIID complex subunit 8 C-term (TAF8_C)Transcription factor TFIID complex subunit 8 C-termThis is the C-terminal, Delta, part of the TAF8 protein [1]. The N-terminal is generally the histone fold domain, Bromo_TP (Pfam:PF07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several gener ...Domain
I [auth J],
U [auth j]
PF03540Transcription initiation factor TFIID 23-30kDa subunit (TAF10)Transcription initiation factor TFIID 23-30kDa subunit- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transcription initiation factor TFIID subunit 1
J [auth L],
W [auth l]
Transcription initiation factor TFIID subunit 12
K [auth O]Transcription initiation factor IIA subunit 2
L [auth P]TATA-box-binding protein
M [auth Q]Transcription initiation factor IIA subunit 1
N [auth X]DNA (72-MER)---
O [auth Y]DNA (72-MER)---
P [auth c]Transcription initiation factor TFIID subunit 3
V [auth k]Transcription initiation factor TFIID subunit 11
X [auth m]Transcription initiation factor TFIID subunit 13
Transcription initiation factor TFIID subunit 2
C [auth D],
Q [auth d]
Transcription initiation factor TFIID subunit 4
D [auth E],
R [auth e]
Transcription initiation factor TFIID subunit 5
E [auth F],
S [auth f]
Transcription initiation factor TFIID subunit 6
F [auth G]Transcription initiation factor TFIID subunit 7
G [auth H]Transcription initiation factor TFIID subunit 8
H [auth I],
T [auth i]
Transcription initiation factor TFIID subunit 9
I [auth J],
U [auth j]
Transcription initiation factor TFIID subunit 10

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018359Bromodomain, conserved siteConserved Site
IPR009067TAFII-230 TBP-bindingDomain
IPR040240Transcription initiation factor TFIID subunit 1Family
IPR011177Transcription initiation factor TFIID subunit 1, animalFamily
IPR022591Transcription initiation factor TFIID subunit 1, histone acetyltransferase domainDomain
IPR036427Bromodomain-like superfamilyHomologous Superfamily
IPR001487BromodomainDomain
IPR041670Zinc knuckleDomain
IPR036741TAFII-230 TBP-binding domain superfamilyHomologous Superfamily
J [auth L],
W [auth l]
IPR009072Histone-foldHomologous Superfamily
J [auth L],
W [auth l]
IPR037794Transcription initiation factor TFIID subunit 12Family
J [auth L],
W [auth l]
IPR003228Transcription initiation factor TFIID subunit 12 domainDomain
K [auth O]IPR015871Transcription initiation factor IIA, gamma subunit, C-terminalDomain
K [auth O]IPR015872Transcription initiation factor IIA, gamma subunit, N-terminalDomain
K [auth O]IPR009083Transcription factor IIA, alpha-helical domainHomologous Superfamily
K [auth O]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
K [auth O]IPR003194Transcription initiation factor IIA, gamma subunitFamily
L [auth P]IPR030491TATA-box binding protein, conserved siteConserved Site
L [auth P]IPR000814TATA-box binding proteinFamily
L [auth P]IPR012295TBP domain superfamilyHomologous Superfamily
L [auth P]IPR033710TATA-box binding protein, eukaryoticFamily
M [auth Q]IPR004855Transcription factor IIA, alpha/beta subunitFamily
M [auth Q]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
P [auth c]IPR009072Histone-foldHomologous Superfamily
P [auth c]IPR001965Zinc finger, PHD-typeDomain
P [auth c]IPR006565Bromodomain associated domainDomain
P [auth c]IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
P [auth c]IPR019787Zinc finger, PHD-fingerDomain
P [auth c]IPR011011Zinc finger, FYVE/PHD-typeHomologous Superfamily
P [auth c]IPR019786Zinc finger, PHD-type, conserved siteConserved Site
V [auth k]IPR009072Histone-foldHomologous Superfamily
V [auth k]IPR045127Transcription initiation factor TFIID subunit 11-likeFamily
V [auth k]IPR006809TAFII28-like protein domainDomain
X [auth m]IPR009072Histone-foldHomologous Superfamily
X [auth m]IPR003195Transcription initiation factor IID, subunit 13Family
IPR016024Armadillo-type foldHomologous Superfamily
IPR027268Peptidase M4/M1, CTD superfamilyHomologous Superfamily
IPR037813Transcription initiation factor TFIID subunit 2Family
IPR042097Aminopeptidase N-like , N-terminal domain superfamliyHomologous Superfamily
C [auth D],
Q [auth d]
IPR003894TAFH/NHR1Domain
C [auth D],
Q [auth d]
IPR007900Transcription initiation factor TFIID component TAF4, C-terminalDomain
C [auth D],
Q [auth d]
IPR009072Histone-foldHomologous Superfamily
C [auth D],
Q [auth d]
IPR045144Transcription initiation factor TFIID component TAF4Family
C [auth D],
Q [auth d]
IPR037249TAFH/NHR1 domain superfamilyHomologous Superfamily
D [auth E],
R [auth e]
IPR007582TFIID subunit TAF5, NTD2 domainDomain
D [auth E],
R [auth e]
IPR019775WD40 repeat, conserved siteConserved Site
D [auth E],
R [auth e]
IPR006594LIS1 homology motifConserved Site
D [auth E],
R [auth e]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth E],
R [auth e]
IPR037264TFIID subunit TAF5, NTD2 domain superfamilyHomologous Superfamily
D [auth E],
R [auth e]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth E],
R [auth e]
IPR001680WD40 repeatRepeat
D [auth E],
R [auth e]
IPR020472G-protein beta WD-40 repeatRepeat
E [auth F],
S [auth f]
IPR011442TAF6, C-terminal HEAT repeat domainDomain
E [auth F],
S [auth f]
IPR016024Armadillo-type foldHomologous Superfamily
E [auth F],
S [auth f]
IPR009072Histone-foldHomologous Superfamily
E [auth F],
S [auth f]
IPR037796Transcription initiation factor TFIID subunit 6Family
E [auth F],
S [auth f]
IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
E [auth F],
S [auth f]
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
F [auth G]IPR006751TAFII55 protein, conserved regionDomain
F [auth G]IPR037817Transcription initiation factor TFIID subunit 7Family
G [auth H]IPR009072Histone-foldHomologous Superfamily
G [auth H]IPR037818Transcription initiation factor TFIID subunit 8Family
G [auth H]IPR006565Bromodomain associated domainDomain
G [auth H]IPR019473Transcription factor TFIID, subunit 8, C-terminalDomain
H [auth I],
T [auth i]
IPR051431Transcription initiation factor TFIID subunit 9Family
H [auth I],
T [auth i]
IPR009072Histone-foldHomologous Superfamily
H [auth I],
T [auth i]
IPR003162Transcription initiation factor TAFII31Family
I [auth J],
U [auth j]
IPR003923Transcription initiation factor TFIID, subunit 10Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP21675
J [auth L],
W [auth l]
PharosQ16514
K [auth O]PharosP52657
L [auth P]PharosP20226
M [auth Q]PharosP52655
P [auth c]PharosQ5VWG9
V [auth k]PharosQ15544
X [auth m]PharosQ15543
PharosQ6P1X5
C [auth D],
Q [auth d]
PharosO00268
D [auth E],
R [auth e]
PharosQ15542
E [auth F],
S [auth f]
PharosP49848
F [auth G]PharosQ15545
G [auth H]PharosQ7Z7C8
H [auth I],
T [auth i]
PharosQ16594
I [auth J],
U [auth j]
PharosQ12962