7JHP | pdb_00007jhp

Crystal structure of HRas in complex with the Ras-binding and cysteine-rich domains of CRaf-kinase


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad7jhpa_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins cH-p21 Ras protein Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth C]SCOP2B SuperfamilyUbiquitin-like 8034476 3000157 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyCysteine-rich domain 8039330 3001452 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8019405 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]RBDe7jhpC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: RBDECOD (1.6)
B [auth C]C1_1e7jhpC2 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: Cysteine-rich domainF: C1_1ECOD (1.6)
ARase7jhpA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RasECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth C]3.10.20.90 Alpha Beta Roll Ubiquitin-like (UB roll) Phosphatidylinositol 3-kinase Catalytic SubunitCATH (utative)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth C]PF02196Raf-like Ras-binding domain (RBD)Raf-like Ras-binding domainDomain
B [auth C]PF00130Phorbol esters/diacylglycerol binding domain (C1 domain) (C1_1)Phorbol esters/diacylglycerol binding domain (C1 domain)This domain is also known as the Protein kinase C conserved region 1 (C1) domain. Domain
PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth C]RAF proto-oncogene serine/threonine-protein kinase
GTPase HRas

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth C]PharosP04049
PharosP01112