Structure of the heteromeric complex between the alpha-N-methyltransferase (SonM) and a truncated construct of the RiPP precursor (SonA) (with SAM)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth J]PP-bindinge7ltrJ1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)
E [auth H]PP-bindinge7ltrH1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)
CPP-bindinge7ltrC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)
APP-bindinge7ltrA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth J]3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase domain 1CATH (utative)
C3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
D,
F [auth I],
H [auth K]
PF07746Aromatic-ring-opening dioxygenase LigAB, LigA subunit (LigA)Aromatic-ring-opening dioxygenase LigAB, LigA subunit- Family
A,
C,
E [auth H],
G [auth J]
PF00590Tetrapyrrole (Corrin/Porphyrin) Methylases (TP_methylase)Tetrapyrrole (Corrin/Porphyrin) MethylasesThis family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function, including Swiss:P45528. This family includes the methylase Dipthine synthase. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
D,
F [auth I],
H [auth K]
LigA domain-containing protein- - -
A,
C,
E [auth H],
G [auth J]
TP-methylase family protein - -