7LZ0 | pdb_00007lz0

Structure of glutamate receptor-like channel GLR3.4 ligand-binding domain in complex with glutamate

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae7lz0A1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)
Be7lz0B1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)
Ce7lz0C1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A, B, C
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Glutamate receptor 3.4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR017103Ionotropic glutamate receptor, plantFamily
A, B, C
IPR028082Periplasmic binding protein-like IHomologous Superfamily
A, B, C
IPR044440Plant glutamate receptor, periplasmic ligand-binding domainDomain
A, B, C
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
A, B, C
IPR015683Ionotropic glutamate receptorFamily
A, B, C
IPR001320Ionotropic glutamate receptor, C-terminalDomain
A, B, C
IPR001828Receptor, ligand binding regionDomain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B, C
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALChannels: Other Ion Channelsglutamate receptor-like channel GLR3.4, full-length