7M2V | pdb_00007m2v

Crystallographic Structure of the Rhombohedral Crystal Form of STMV Grown from Chloride

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X [auth I]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
V [auth GG]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
T [auth H]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
P [auth G]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
O [auth KK]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
N [auth D]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
LA [auth NN]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
K [auth FX]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
I [auth JJ]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
H [auth II]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
GA [auth K]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
G [auth HH]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
F [auth M]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
E [auth J]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
DA [auth O]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
AA [auth L]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth I]	ubiquitin	e7m2vI1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
V [auth GG]	ubiquitin	e7m2vGG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
T [auth H]	ubiquitin	e7m2vH1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
P [auth G]	ubiquitin	e7m2vG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
O [auth KK]	ubiquitin	e7m2vKK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
N [auth D]	ubiquitin	e7m2vD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
LA [auth NN]	ubiquitin	e7m2vNN1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
K [auth FX]	ubiquitin	e7m2vFX1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
I [auth JJ]	ubiquitin	e7m2vJJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
H [auth II]	ubiquitin	e7m2vII1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
GA [auth K]	ubiquitin	e7m2vK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
G [auth HH]	ubiquitin	e7m2vHH1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
F [auth M]	ubiquitin	e7m2vM1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
E [auth J]	ubiquitin	e7m2vJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
DA [auth O]	ubiquitin	e7m2vO1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
D [auth E]	ubiquitin	e7m2vE1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
C	ubiquitin	e7m2vC1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
B	ubiquitin	e7m2vB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
AA [auth L]	ubiquitin	e7m2vL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
A	ubiquitin	e7m2vA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth TT], EA [auth P], HA [auth Y], JA [auth ff], L [auth S], BA [auth TT], EA [auth P], HA [auth Y], JA [auth ff], L [auth S], NA [auth zz], Q [auth V], S [auth k], W [auth U], Y [auth X]	RNA (5'-R(PAPAPAPAPAPAPAPAPAPAPAPA)-3')	-	-	-
CA [auth i], FA [auth e], IA [auth n], J [auth QQ], KA [auth xx], CA [auth i], FA [auth e], IA [auth n], J [auth QQ], KA [auth xx], M [auth h], MA [auth yy], R [auth ww], U [auth T], Z [auth m]	RNA (5'-R(PUPUPUPUPUPUPUPUPUPUPUPU)-3')	-	-	-
A, AA [auth L], B, C, D [auth E], A, AA [auth L], B, C, D [auth E], DA [auth O], E [auth J], F [auth M], G [auth HH], GA [auth K], H [auth II], I [auth JJ], K [auth FX], LA [auth NN], N [auth D], O [auth KK], P [auth G], T [auth H], V [auth GG], X [auth I]	Coat protein	structural molecule activity	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth L], B, C, D [auth E], A, AA [auth L], B, C, D [auth E], DA [auth O], E [auth J], F [auth M], G [auth HH], GA [auth K], H [auth II], I [auth JJ], K [auth FX], LA [auth NN], N [auth D], O [auth KK], P [auth G], T [auth H], V [auth GG], X [auth I]	IPR037164	Satellite virus coat domain superfamily	Homologous Superfamily