7NTM | pdb_00007ntm

Cryo-EM structure of S.cerevisiae native alcohol dehydrogenase 1 (ADH1) in its tetrameric apo state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	ADH_N	e7ntmC2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: ADH_N	ECOD (1.6)
D [auth C]	ADH_zinc_N	e7ntmC1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: ADH_zinc_N	ECOD (1.6)
C [auth D]	ADH_N	e7ntmD2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: ADH_N	ECOD (1.6)
C [auth D]	ADH_zinc_N	e7ntmD1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: ADH_zinc_N	ECOD (1.6)
B	ADH_N	e7ntmB2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: ADH_N	ECOD (1.6)
B	ADH_zinc_N	e7ntmB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: ADH_zinc_N	ECOD (1.6)
A	ADH_N	e7ntmA1	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: ADH_N	ECOD (1.6)
A	ADH_zinc_N	e7ntmA2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: ADH_zinc_N	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth C]	PF00107	Zinc-binding dehydrogenase (ADH_zinc_N)	Zinc-binding dehydrogenase		Domain
A, B, C [auth D], D [auth C]	PF08240	Alcohol dehydrogenase GroES-like domain (ADH_N)	Alcohol dehydrogenase GroES-like domain	This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure [1-2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth C]	Alcohol dehydrogenase 1	octanol dehydrogenase (NAD+) activity alcohol dehydrogenase [NAD(P)+] activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors alcohol dehydrogenase (NAD+) activity catalytic activity ethanol dehydrogenase (NAD+) activity melatonin binding amide binding binding butanol dehydrogenase (NAD+) activity cation binding transition metal ion binding octanol dehydrogenase (NAD+) activity alcohol dehydrogenase [NAD(P)+] activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors alcohol dehydrogenase (NAD+) activity catalytic activity ethanol dehydrogenase (NAD+) activity melatonin binding amide binding binding butanol dehydrogenase (NAD+) activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding allyl-alcohol dehydrogenase activity identical protein binding protein binding methylglyoxal reductase (NADH) activity	pyruvate metabolic process catabolic process oxoacid metabolic process energy derivation by oxidation of organic compounds pyruvate fermentation carboxylic acid metabolic process alcohol metabolic process organic acid metabolic process organic acid catabolic process generation of precursor metabolites and energy ethanol metabolic process fermentation pyruvate fermentation to ethanol monocarboxylic acid catabolic process carboxylic acid catabolic process pyruvate metabolic process catabolic process oxoacid metabolic process energy derivation by oxidation of organic compounds pyruvate fermentation carboxylic acid metabolic process alcohol metabolic process organic acid metabolic process organic acid catabolic process generation of precursor metabolites and energy ethanol metabolic process fermentation pyruvate fermentation to ethanol monocarboxylic acid catabolic process carboxylic acid catabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process small molecule catabolic process pyruvate catabolic process primary alcohol metabolic process small molecule biosynthetic process amino acid metabolic process primary metabolic process amino acid catabolic process via Ehrlich pathway biosynthetic process amino acid catabolic process to alcohol via Ehrlich pathway alcohol biosynthetic process amino acid catabolic process	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth C]	IPR013154	Alcohol dehydrogenase-like, N-terminal	Domain
A, B, C [auth D], D [auth C]	IPR011032	GroES-like superfamily	Homologous Superfamily
A, B, C [auth D], D [auth C]	IPR002328	Alcohol dehydrogenase, zinc-type, conserved site	Conserved Site
A, B, C [auth D], D [auth C]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C [auth D], D [auth C]	IPR013149	Alcohol dehydrogenase-like, C-terminal	Domain
A, B, C [auth D], D [auth C]	IPR020843	Enoylreductase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.