Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2 FamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105494 4002057 SCOP2 (2022-06-29)
GSCOP2 SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105495 3000770 SCOP2 (2022-06-29)
Q [auth R]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105495 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105459 3000806 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105459 3000806 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105493 3000787 SCOP2B (2022-06-29)
T [auth V]SCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105493 3000787 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105489 3000779 SCOP2B (2022-06-29)
S [auth U]SCOP2 FamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105488 4002059 SCOP2 (2022-06-29)
S [auth U]SCOP2 SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8105489 3000779 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M16_Ce7o3hA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
APeptidase_M16e7o3hA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
K [auth L]Peptidase_M16_Ce7o3hL2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
K [auth L]Peptidase_M16e7o3hL1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
CCytochrom_B_Ce7o3hC2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
CCytochrome_Be7o3hC1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
M [auth N]Cytochrom_B_Ce7o3hN2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
M [auth N]Cytochrome_Be7o3hN1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
DCytochrom_C1_Ne7o3hD1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
DCytochrom_C1_Ce7o3hD2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
N [auth O]Cytochrom_C1_Ne7o3hO1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
N [auth O]Cytochrom_C1_Ce7o3hO2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
ERieske_cytochrome_bc1e7o3hE1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
ERieske_6e7o3hE3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
EUCR_TMe7o3hE2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
O [auth P]Rieske_cytochrome_bc1e7o3hP1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
O [auth P]Rieske_6e7o3hP3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
O [auth P]UCR_TMe7o3hP2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
FUCR_14kDe7o3hF1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
P [auth Q]UCR_14kDe7o3hQ1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
GUcrQe7o3hG1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
Q [auth R]UcrQe7o3hR1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
HUCR_hingee7o3hH1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
R [auth S]UCR_hingee7o3hS1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
J [auth K]UCR_6-4kDe7o3hK1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_6-4kDECOD (1.6)
T [auth V]UCR_6-4kDe7o3hV1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_6-4kDECOD (1.6)
U [auth T]Ubiq-Cytc-red_Ne7o3hT1 A: extended segmentsX: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)T: Ubiquinol-cytochrome c reductase 8 kDa proteinF: Ubiq-Cytc-red_NECOD (1.6)
BPeptidase_M16_Ce7o3hB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
BPeptidase_M16e7o3hB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
L [auth M]Peptidase_M16_Ce7o3hM2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
L [auth M]Peptidase_M16e7o3hM1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
I [auth J]UCR_UQCRX_QCR9e7o3hJ1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
S [auth U]UCR_UQCRX_QCR9e7o3hU1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
K [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A,
K [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C,
M [auth N]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C,
M [auth N]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
D,
N [auth O]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E,
O [auth P]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E,
O [auth P]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
F,
P [auth Q]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
G,
Q [auth R]
PF02939UcrQ family (UcrQ)UcrQ family- Family
H,
R [auth S]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
J [auth K],
T [auth V]
PF08997Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD)Ubiquinol-cytochrome C reductase complex, 6.4kD proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein binding factor [1].
Domain
U [auth T]PF09165Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N)Ubiquinol-cytochrome c reductase 8 kDa, N-terminalMembers of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1].Domain
B,
L [auth M]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
B,
L [auth M]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
I [auth J],
S [auth U]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
K [auth L]
Cytochrome b-c1 complex subunit 1, mitochondrial
C,
M [auth N]
Cytochrome b
D,
N [auth O]
Cytochrome c1, heme protein, mitochondrial
E,
O [auth P]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F,
P [auth Q]
Cytochrome b-c1 complex subunit 7
G,
Q [auth R]
Cytochrome b-c1 complex subunit 8-
H,
R [auth S]
Cytochrome b-c1 complex subunit 6, mitochondrial
J [auth K],
T [auth V]
Cytochrome b-c1 complex subunit 10-
U [auth T]Cytochrome b-c1 complex subunit 9
B,
L [auth M]
Cytochrome b-c1 complex subunit 2, mitochondrial
I [auth J],
S [auth U]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
K [auth L]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth L]
IPR011765Peptidase M16, N-terminalDomain
C,
M [auth N]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth N]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth N]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR005797Cytochrome b/b6, N-terminal domainDomain
C,
M [auth N]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR030689Cytochrome bFamily
D,
N [auth O]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth O]
IPR002326Cytochrome c1Family
D,
N [auth O]
IPR009056Cytochrome c-like domainDomain
D,
N [auth O]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E,
O [auth P]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth P]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E,
O [auth P]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth P]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E,
O [auth P]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth P]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth P]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F,
P [auth Q]
IPR003197Cytochrome b-c1 complex subunit 7Family
F,
P [auth Q]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G,
Q [auth R]
IPR004205Cytochrome b-c1 complex subunit 8Family
G,
Q [auth R]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H,
R [auth S]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
R [auth S]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
R [auth S]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
J [auth K],
T [auth V]
IPR029027Single alpha-helix domain superfamilyHomologous Superfamily
J [auth K],
T [auth V]
IPR015089Cytochrome b-c1 complex subunit 10Family
U [auth T]IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
U [auth T]IPR014349Rieske iron-sulphur proteinFamily
U [auth T]IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
U [auth T]IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
U [auth T]IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
U [auth T]IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
U [auth T]IPR005805Rieske iron-sulphur protein, C-terminalDomain
U [auth T]IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
U [auth T]IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
B,
L [auth M]
IPR007863Peptidase M16, C-terminalDomain
B,
L [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
L [auth M]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth M]
IPR001431Peptidase M16, zinc-binding siteBinding Site
I [auth J],
S [auth U]
IPR008027Cytochrome b-c1 complex subunit 9Family
I [auth J],
S [auth U]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily