7OK2 | pdb_00007ok2

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 3

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth V]	V-set	e7ok2V1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
Y [auth U]	V-set	e7ok2U1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
X [auth T]	V-set	e7ok2T1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
W [auth S]	V-set	e7ok2S1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
V [auth R]	V-set	e7ok2R1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
U [auth Q]	V-set	e7ok2Q1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
T [auth P]	V-set	e7ok2P1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
S [auth O]	V-set	e7ok2O1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
R [auth N]	V-set	e7ok2N1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
Q [auth M]	V-set	e7ok2M1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
P [auth L]	V-set	e7ok2L1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
O [auth K]	V-set	e7ok2K1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
N [auth J]	V-set	e7ok2J1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
M [auth I]	V-set	e7ok2I1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
L [auth H]	V-set	e7ok2H1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
K [auth G]	V-set	e7ok2G1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
J [auth F]	V-set	e7ok2F1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
I [auth E]	V-set	e7ok2E1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
H [auth D]	V-set	e7ok2D1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
G [auth C]	V-set	e7ok2C1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
F [auth B]	V-set	e7ok2B1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
E [auth A]	V-set	e7ok2A1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
DA [auth Z]	V-set	e7ok2Z1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
D [auth 4]	V-set	e7ok241	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
CA [auth Y]	V-set	e7ok2Y1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
C [auth 3]	V-set	e7ok231	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
BA [auth X]	V-set	e7ok2X1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
B [auth 2]	V-set	e7ok221	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
AA [auth W]	V-set	e7ok2W1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)
A [auth 1]	V-set	e7ok211	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2 (Acetyltransf_11)	Udp N-acetylglucosamine O-acyltransferase; Domain 2	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyris ...	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyristoyl)glucosamine and acetate.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity O-acyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process cellular process macromolecule metabolic process lipid metabolic process lipooligosaccharide metabolic process glycolipid metabolic process lipid A biosynthetic process glycolipid biosynthetic process phospholipid biosynthetic process phospholipid metabolic process lipid A metabolic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR029098	UDP N-acetylglucosamine O-acyltransferase, C-terminal	Domain
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	Family
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR037157	UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily	Homologous Superfamily
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR001451	Hexapeptide repeat	Repeat