7PJU | pdb_00007pju

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
ZA [auth s]	SCOP2 Family	Ribosomal protein S19	8105585	4001081	SCOP2 (2022-06-29)
ZA [auth s]	SCOP2 Superfamily	Ribosomal protein S19	8105586	3000686	SCOP2 (2022-06-29)
XA [auth q]	SCOP2 Family	Cold shock DNA-binding domain-like	8105745	4001909	SCOP2 (2022-06-29)
XA [auth q]	SCOP2 Superfamily	Nucleic acid-binding proteins	8105746	3000135	SCOP2 (2022-06-29)
WA [auth p]	SCOP2 Family	Ribosomal protein S16	8105609	4001077	SCOP2 (2022-06-29)
WA [auth p]	SCOP2 Superfamily	Ribosomal protein S16	8105610	3000680	SCOP2 (2022-06-29)
VA [auth o]	SCOP2 Family	30S Ribosomal protein S15 / 40S Ribosomal protein S13	8105677	4000767	SCOP2 (2022-06-29)
VA [auth o]	SCOP2 Superfamily	S15/NS1 RNA-binding domain	8105678	3001284	SCOP2 (2022-06-29)
TA [auth m]	SCOP2 Family	Ribosomal protein S13	8105723	4000260	SCOP2 (2022-06-29)
TA [auth m]	SCOP2 Superfamily	S13-like H2TH domain	8105724	3000053	SCOP2 (2022-06-29)
SA [auth l]	SCOP2 Family	Cold shock DNA-binding domain-like	8105965	4001909	SCOP2 (2022-06-29)
SA [auth l]	SCOP2 Superfamily	Nucleic acid-binding proteins	8105966	3000135	SCOP2 (2022-06-29)
NA [auth g]	SCOP2 Family	Ribosomal protein S7	8105611	4001112	SCOP2 (2022-06-29)
NA [auth g]	SCOP2 Superfamily	Ribosomal protein S7	8105612	3000799	SCOP2 (2022-06-29)
KA [auth d]	SCOP2 Family	Ribosomal protein S4	8105675	4001399	SCOP2 (2022-06-29)
KA [auth d]	SCOP2 Superfamily	Alpha-L RNA-binding motif	8105676	3001473	SCOP2 (2022-06-29)
GA [auth Z]	SCOP2 Family	Ribosomal protein L30p/L7e	8105957	4001360	SCOP2 (2022-06-29)
GA [auth Z]	SCOP2 Superfamily	Ribosomal protein L30p/L7e	8105958	3001378	SCOP2 (2022-06-29)
EA [auth X]	SCOP2 Family	Ribosomal protein L28	8105607	4003961	SCOP2 (2022-06-29)
EA [auth X]	SCOP2 Superfamily	L28p-like	8105608	3001966	SCOP2 (2022-06-29)
BA [auth U]	SCOP2 Family	Ribosomal proteins L24p and L21e	8105673	4001752	SCOP2 (2022-06-29)
BA [auth U]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8105674	3000334	SCOP2 (2022-06-29)
AA [auth T]	SCOP2 Family	L23p	8105747	4000943	SCOP2 (2022-06-29)
AA [auth T]	SCOP2 Superfamily	Ribosomal proteins S24e, L23 and L15e	8105748	3000210	SCOP2 (2022-06-29)
Z [auth S]	SCOP2 Family	Ribosomal protein L22	8105671	4001212	SCOP2 (2022-06-29)
Z [auth S]	SCOP2 Superfamily	Ribosomal protein L22	8105672	3001078	SCOP2 (2022-06-29)
Y [auth R]	SCOP2 Family	Ribosomal protein l21p	8105733	4001630	SCOP2 (2022-06-29)
Y [auth R]	SCOP2 Superfamily	l21p-like	8105734	3002005	SCOP2 (2022-06-29)
U [auth N]	SCOP2 Family	Prokaryotic ribosomal protein L17	8105737	4003526	SCOP2 (2022-06-29)
U [auth N]	SCOP2 Superfamily	Prokaryotic ribosomal protein L17	8105738	3000995	SCOP2 (2022-06-29)
R [auth K]	SCOP2 Family	Ribosomal protein L14	8105753	4001826	SCOP2 (2022-06-29)
R [auth K]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8105754	3000433	SCOP2 (2022-06-29)
Q [auth J]	SCOP2 Family	Ribosomal protein L13	8105735	4003623	SCOP2 (2022-06-29)
Q [auth J]	SCOP2 Superfamily	Ribosomal protein L13	8105736	3001134	SCOP2 (2022-06-29)
M [auth F]	SCOP2 Family	Ribosomal protein L5	8105743	4001498	SCOP2 (2022-06-29)
M [auth F]	SCOP2 Superfamily	RL5-like	8105744	3001709	SCOP2 (2022-06-29)
L [auth E]	SCOP2 Family	Ribosomal protein L4	8105741	4003628	SCOP2 (2022-06-29)
L [auth E]	SCOP2 Superfamily	Ribosomal protein L4	8105742	3001146	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth 6]	Arm, ARM_PUB	e7pju61	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
F [auth 5]	Arm, ARM_PUB	e7pju51	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
BB [auth u]	Arm, ARM_PUB	e7pjuu1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
AB [auth t]	Arm, ARM_PUB	e7pjut1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
ZA [auth s]	Arm, ARM_PUB	e7pjus1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
YA [auth r]	Arm, ARM_PUB	e7pjur1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
XA [auth q]	Arm, ARM_PUB	e7pjuq1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
E [auth 4]	Arm, ARM_PUB	e7pju41	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
WA [auth p]	Arm, ARM_PUB	e7pjup1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
VA [auth o]	Arm, ARM_PUB	e7pjuo1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
UA [auth n]	Arm, ARM_PUB	e7pjun1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
TA [auth m]	Arm, ARM_PUB	e7pjum1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
SA [auth l]	Arm, ARM_PUB	e7pjul1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
RA [auth k]	Arm, ARM_PUB	e7pjuk1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
QA [auth j]	Arm, ARM_PUB	e7pjuj1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
PA [auth i]	Arm, ARM_PUB	e7pjui1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
OA [auth h]	Arm, ARM_PUB	e7pjuh1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
NA [auth g]	Arm, ARM_PUB	e7pjug1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
D [auth 3]	Arm, ARM_PUB	e7pju31	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
MA [auth f]	Arm, ARM_PUB	e7pjuf1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
LA [auth e]	Arm, ARM_PUB	e7pjue1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
KA [auth d]	Arm, ARM_PUB	e7pjud1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
JA [auth c]	Arm, ARM_PUB	e7pjuc1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
IA [auth b]	Arm, ARM_PUB	e7pjub1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
GA [auth Z]	Arm, ARM_PUB	e7pjuZ1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
FA [auth Y]	Arm, ARM_PUB	e7pjuY1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
EA [auth X]	Arm, ARM_PUB	e7pjuX1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
DA [auth W]	Arm, ARM_PUB	e7pjuW1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
C [auth 2]	Arm, ARM_PUB	e7pju21	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
CA [auth V]	Arm, ARM_PUB	e7pjuV1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
BA [auth U]	Arm, ARM_PUB	e7pjuU1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
AA [auth T]	Arm, ARM_PUB	e7pjuT1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
Z [auth S]	Arm, ARM_PUB	e7pjuS1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
Y [auth R]	Arm, ARM_PUB	e7pjuR1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
X [auth Q]	Arm, ARM_PUB	e7pjuQ1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
W [auth P]	Arm, ARM_PUB	e7pjuP1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
V [auth O]	Arm, ARM_PUB	e7pjuO1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
U [auth N]	Arm, ARM_PUB	e7pjuN1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
T [auth M]	Arm, ARM_PUB	e7pjuM1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
B [auth 1]	Arm, ARM_PUB	e7pju11	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
S [auth L]	Arm, ARM_PUB	e7pjuL1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
R [auth K]	Arm, ARM_PUB	e7pjuK1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
Q [auth J]	Arm, ARM_PUB	e7pjuJ1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
P [auth I]	Arm, ARM_PUB	e7pjuI1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
O [auth H]	Arm, ARM_PUB	e7pjuH1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
N [auth G]	Arm, ARM_PUB	e7pjuG1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
M [auth F]	Arm, ARM_PUB	e7pjuF1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
L [auth E]	Arm, ARM_PUB	e7pjuE1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
K [auth D]	Arm, ARM_PUB	e7pjuD1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
J [auth C]	Arm, ARM_PUB	e7pjuC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)
A [auth 0]	Arm, ARM_PUB	e7pju01	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Arm, ARM_PUB	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth B]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
G [auth 6]	PF01197	Ribosomal protein L31 (Ribosomal_L31)	Ribosomal protein L31	-	Family
F [auth 5]	PF00466	Ribosomal protein L10 (Ribosomal_L10)	Ribosomal protein L10	-	Family
E [auth 4]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36		Domain
D [auth 3]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
GA [auth Z]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
FA [auth Y]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
EA [auth X]	PF00830	Ribosomal L28 family (Ribosomal_L28)	Ribosomal L28 family	-	Family
C [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
CA [auth V]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
BA [auth U]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
BA [auth U]	PF00467	KOW motif (KOW)	KOW motif	-	Family
AA [auth T]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
Z [auth S]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
Z [auth S]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
Y [auth R]	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
Y [auth R]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
X [auth Q]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
X [auth Q]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
W [auth P]	PF00886	Ribosomal protein S16 (Ribosomal_S16)	Ribosomal protein S16	-	Family
W [auth P]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
V [auth O]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
U [auth N]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
U [auth N]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
T [auth M]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
T [auth M]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
B [auth 1]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
S [auth L]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
S [auth L]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
R [auth K]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
R [auth K]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
Q [auth J]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
Q [auth J]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
P [auth I]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
P [auth I]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
P [auth I]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
O [auth H]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
O [auth H]	PF03948	Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)	Ribosomal protein L9, C-terminal domain		Domain
O [auth H]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
N [auth G]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
N [auth G]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
M [auth F]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
M [auth F]	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain
M [auth F]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
L [auth E]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
L [auth E]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
L [auth E]	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
K [auth D]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
K [auth D]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
K [auth D]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
J [auth C]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
J [auth C]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
J [auth C]	PF07650	KH domain (KH_2)	KH domain		Domain
J [auth C]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
A [auth 0]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth B]	5S ribosomal RNA	-	-	-
H [auth A]	23S ribosomal RNA	-	-	-
G [auth 6]	50S ribosomal protein L31	-	-	-
F [auth 5]	50S ribosomal protein L10	-	-	-
FB [auth z]	mRNA	-	-	-
EB [auth y]	Dipeptide (FME-PHE)	-	-	-
DB [auth w]	P-site fMet-Phe-tRNA(Phe)	-	-	-
CB [auth v]	P-site tRNA(fMet)	-	-	-
BB [auth u]	30S ribosomal protein S21	-	-	-
AB [auth t]	30S ribosomal protein S20	-	-	-
ZA [auth s]	30S ribosomal protein S19	-	-	-
YA [auth r]	30S ribosomal protein S18	-	-	-
XA [auth q]	30S ribosomal protein S17	-	-	-
E [auth 4]	50S ribosomal protein L36	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
WA [auth p]	30S ribosomal protein S16	-	-	-
VA [auth o]	30S ribosomal protein S15	-	-	-
UA [auth n]	30S ribosomal protein S14	-	-	-
TA [auth m]	30S ribosomal protein S13	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome
SA [auth l]	30S ribosomal protein S12	-	-	-
RA [auth k]	30S ribosomal protein S11	-	-	-
QA [auth j]	30S ribosomal protein S10	-	-	-
PA [auth i]	30S ribosomal protein S9	-	-	-
OA [auth h]	30S ribosomal protein S8	-	-	-
NA [auth g]	30S ribosomal protein S7	-	-	-
D [auth 3]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
MA [auth f]	30S ribosomal protein S6, fully modified isoform	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding mRNA 5'-UTR binding mRNA binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome
LA [auth e]	30S ribosomal protein S5	-	-	-
KA [auth d]	Ribosomal protein S4	-	-	-
JA [auth c]	30S ribosomal protein S3	-	-	-
IA [auth b]	30S ribosomal protein S2	-	-	-
HA [auth a]	16S ribosomal RNA	-	-	-
GA [auth Z]	50S ribosomal protein L30	-	-	-
FA [auth Y]	50S ribosomal protein L29	-	-	-
EA [auth X]	50S ribosomal protein L28	-	-	-
DA [auth W]	50S ribosomal protein L27	-	-	-
C [auth 2]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth V]	50S ribosomal protein L25	-	-	-
BA [auth U]	Ribosomal protein L24	-	-	-
AA [auth T]	50S ribosomal protein L23	-	-	-
Z [auth S]	Ribosomal protein L22	-	-	-
Y [auth R]	50S ribosomal protein L21	-	-	-
X [auth Q]	50S ribosomal protein L20	-	-	-
W [auth P]	50S ribosomal protein L19	-	-	-
V [auth O]	50S ribosomal protein L18	-	-	-
U [auth N]	50S ribosomal protein L17	-	-	-
T [auth M]	50S ribosomal protein L16	-	-	-
B [auth 1]	50S ribosomal protein L33	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly response to stimulus response to chemical response to antibiotic	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
S [auth L]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth K]	50S ribosomal protein L14	-	-	-
Q [auth J]	50S ribosomal protein L13	-	-	-
P [auth I]	Ribosomal protein L11	-	-	-
O [auth H]	50S ribosomal protein L9	-	-	-
N [auth G]	50S ribosomal protein L6	-	-	-
M [auth F]	50S ribosomal protein L5	-	-	-
L [auth E]	50S ribosomal protein L4	-	-	-
K [auth D]	50S ribosomal protein L3	-	-	-
J [auth C]	50S ribosomal protein L2	-	-	-
A [auth 0]	50S ribosomal protein L32	structural molecule activity structural constituent of ribosome	response to stimulus response to radiation response to abiotic stimulus primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process response to stimulus response to radiation response to abiotic stimulus primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process response to oxidative stress response to stress response to chemical response to oxygen-containing compound response to reactive oxygen species ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth 4]	IPR000473	Large ribosomal subunit protein bL36	Family
E [auth 4]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
TA [auth m]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
TA [auth m]	IPR001892	Small ribosomal subunit protein uS13	Family
TA [auth m]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
TA [auth m]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
TA [auth m]	IPR019980	Small ribosomal subunit protein uS13, bacteria	Family
D [auth 3]	IPR021137	Large ribosomal subunit protein bL35-like	Family
D [auth 3]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
D [auth 3]	IPR001706	Large ribosomal subunit protein bL35	Family
D [auth 3]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
MA [auth f]	IPR020815	Small ribosomal subunit protein bS6, conserved site	Conserved Site
MA [auth f]	IPR000529	Small ribosomal subunit protein bS6	Family
MA [auth f]	IPR020814	Small ribosomal subunit protein bS6, plastid/chloroplast	Family
MA [auth f]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
MA [auth f]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily
C [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
C [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
B [auth 1]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
B [auth 1]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
B [auth 1]	IPR001705	Large ribosomal subunit protein bL33	Family
B [auth 1]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
S [auth L]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
S [auth L]	IPR030878	Large ribosomal subunit protein uL15	Family
S [auth L]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
S [auth L]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
S [auth L]	IPR063184	Ribosomal protein uL15, N-terminal region	Domain
S [auth L]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
A [auth 0]	IPR002677	Large ribosomal subunit protein bL32	Family
A [auth 0]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
A [auth 0]	IPR044957	Large ribosomal subunit protein bL32, bacteria	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
H [auth A]	1MG	Parent Component: G
H [auth A]	2MA	Parent Component: A
H [auth A]	2MG	Parent Component: G
H [auth A]	3TD	Parent Component: U
H [auth A]	5MC	Parent Component: C
H [auth A]	5MU	Parent Component: U
H [auth A]	6MZ	Parent Component: A
H [auth A]	G7M	Parent Component: G
H [auth A]	OMC	Parent Component: C
H [auth A]	OMG	Parent Component: G
H [auth A]	OMU	Parent Component: U
H [auth A]	PSU	Parent Component: U
EB [auth y]	FME	Parent Component: MET : AA0021 , AA0566 : N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
DB [auth w]	4SU	Parent Component: U : AA0021 , AA0566
DB [auth w]	5MU	Parent Component: U : AA0021 , AA0566
DB [auth w]	G7M	Parent Component: G : AA0021 , AA0566
DB [auth w]	MIA	Parent Component: A : AA0021 , AA0566
DB [auth w]	PSU	Parent Component: U : AA0021 , AA0566
CB [auth v]	4SU	Parent Component: U : AA0021 , AA0566
CB [auth v]	5MU	Parent Component: U : AA0021 , AA0566
CB [auth v]	H2U	Parent Component: U : AA0021 , AA0566
CB [auth v]	PSU	Parent Component: U : AA0021 , AA0566
HA [auth a]	2MG	Parent Component: G : AA0021 , AA0566
HA [auth a]	4OC	Parent Component: C : AA0021 , AA0566
HA [auth a]	5MC	Parent Component: C : AA0021 , AA0566
HA [auth a]	G7M	Parent Component: G : AA0021 , AA0566
HA [auth a]	MA6	Parent Component: A : AA0021 , AA0566
HA [auth a]	PSU	Parent Component: U : AA0021 , AA0566
HA [auth a]	UR3	Parent Component: U : AA0021 , AA0566