7PLT | pdb_00007plt

Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2B SuperfamilyEF-hand 8032927 3001983 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyP-loop motor domain 8032926 3002036 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMyosin s1 fragment, N-terminal domain 8032925 3000319 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth B]Ion_transe7pltB1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ion_transECOD (develop294)
B [auth C]Arm, ARM_PUBe7pltC1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arm, ARM_PUBECOD (develop294)
AArm, ARM_PUBe7pltA1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arm, ARM_PUBECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.58.530 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00612IQ calmodulin-binding motif (IQ)IQ calmodulin-binding motif- Motif
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth B]Myosin light chain 6B
C [auth H]Phalloidin---
B [auth C]Actin, alpha skeletal muscle
Unconventional myosin-Va

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth H]DTH RESIDAA0199

PSI-MOD :  D-allo-threonine MOD:00863
C [auth H]EEP RESIDAA0199

C [auth H]HYP Parent Component: PRO

RESIDAA0199 , AA0030

PSI-MOD :  D-allo-threonine MOD:00863 , 4-hydroxy-L-proline MOD:00039
B [auth C]HIC Parent Component: HIS

RESIDAA0199 , AA0030 , AA0317

PSI-MOD :  D-allo-threonine MOD:00863 , 4-hydroxy-L-proline MOD:00039 , 1'-methyl-L-histidine MOD:00322