7Q2W | pdb_00007q2w

Mutant T91S of uridine phosphorylase from Shewanella oneidensis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth BBB]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)
E [auth EEE]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)
D [auth CCC]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)
C [auth AAA]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)
B [auth FFF]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)
A [auth DDD]	SCOP2B Superfamily	Purine and uridine phosphorylases	8074241	3000626	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth BBB]	VEGFR-1-like_Ig-like	e7q2wBBB1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)
E [auth EEE]	VEGFR-1-like_Ig-like	e7q2wEEE1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)
D [auth CCC]	VEGFR-1-like_Ig-like	e7q2wCCC1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)
C [auth AAA]	VEGFR-1-like_Ig-like	e7q2wAAA1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)
B [auth FFF]	VEGFR-1-like_Ig-like	e7q2wFFF1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)
A [auth DDD]	VEGFR-1-like_Ig-like	e7q2wDDD1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: VEGFR-1-like_Ig-like	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	PF01048	Phosphorylase superfamily (PNP_UDP_1)	Phosphorylase superfamily	Members of this family include: purine nucleoside phosphorylase (PNP) Uridine phosphorylase (UdRPase) 5'-methylthioadenosine phosphorylase (MTA phosphorylase)	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	Uridine phosphorylase	pentosyltransferase activity glycosyltransferase activity uridine phosphorylase activity transferase activity catalytic activity pyrimidine-nucleoside phosphorylase activity	ribose phosphate metabolic process nucleotide biosynthetic process pyrimidine ribonucleotide salvage carbohydrate derivative metabolic process pyrimidine nucleotide metabolic process pyrimidine-containing compound salvage nucleobase-containing compound metabolic process pyrimidine nucleotide salvage nucleotide salvage metabolic compound salvage ribonucleotide biosynthetic process UMP salvage UMP biosynthetic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process ribose phosphate metabolic process nucleotide biosynthetic process pyrimidine ribonucleotide salvage carbohydrate derivative metabolic process pyrimidine nucleotide metabolic process pyrimidine-containing compound salvage nucleobase-containing compound metabolic process pyrimidine nucleotide salvage nucleotide salvage metabolic compound salvage ribonucleotide biosynthetic process UMP salvage UMP biosynthetic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process UMP metabolic process small molecule metabolic process pyrimidine-containing compound biosynthetic process phosphorus metabolic process nucleoside monophosphate metabolic process ribose phosphate biosynthetic process pyrimidine ribonucleotide metabolic process nucleoside phosphate metabolic process carbohydrate derivative biosynthetic process pyrimidine nucleoside monophosphate metabolic process pyrimidine ribonucleoside monophosphate metabolic process pyrimidine-containing compound metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleotide metabolic process nucleoside monophosphate biosynthetic process biosynthetic process pyrimidine ribonucleoside monophosphate biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process pyrimidine nucleoside monophosphate biosynthetic process ribonucleoside monophosphate biosynthetic process pyrimidine nucleotide biosynthetic process pyrimidine ribonucleotide biosynthetic process carbohydrate derivative catabolic process catabolic process glycosyl compound catabolic process nucleoside metabolic process nucleobase-containing compound catabolic process nucleobase-containing small molecule catabolic process nucleoside catabolic process small molecule catabolic process organophosphate catabolic process nucleoside phosphate catabolic process nucleotide catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	IPR018016	Nucleoside phosphorylase, conserved site	Conserved Site
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	IPR035994	Nucleoside phosphorylase superfamily	Homologous Superfamily
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	IPR010058	Uridine phosphorylase	Family
A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], A [auth DDD], B [auth FFF], C [auth AAA], D [auth CCC], E [auth EEE], F [auth BBB]	IPR000845	Nucleoside phosphorylase domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.