7QIJ | pdb_00007qij

Complex of the Yersinia enterocolitica Type III secretion export gate YscV with substrate:chaperone complex YscX:YscY

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth MC]	WD40	e7qijMC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
Z [auth RC]	WD40	e7qijRC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
XA [auth DC]	WD40	e7qijDC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
X [auth KC]	WD40	e7qijKC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
VA [auth BC]	WD40	e7qijBC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
V [auth JC]	WD40	e7qijJC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
TA [auth AC]	WD40	e7qijAC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
T [auth CC]	WD40	e7qijCC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
RA [auth IC]	WD40	e7qijIC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
PA [auth HC]	WD40	e7qijHC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
NA [auth FC]	WD40	e7qijFC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
LA [auth EC]	WD40	e7qijEC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
JA [auth PC]	WD40	e7qijPC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
HA [auth OC]	WD40	e7qijOC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
FA [auth NC]	WD40	e7qijNC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
DA [auth LC]	WD40	e7qijLC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
BB [auth QC]	WD40	e7qijQC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
BA [auth GC]	WD40	e7qijGC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
R [auth RA]	WD40	e7qijRA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
Q [auth QA]	WD40	e7qijQA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
P [auth PA]	WD40	e7qijPA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
O [auth OA]	WD40	e7qijOA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
N [auth NA]	WD40	e7qijNA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
M [auth MA]	WD40	e7qijMA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
L [auth LA]	WD40	e7qijLA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
K [auth KA]	WD40	e7qijKA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
J [auth JA]	WD40	e7qijJA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
I [auth IA]	WD40	e7qijIA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
H [auth HA]	WD40	e7qijHA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
G [auth GA]	WD40	e7qijGA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
F [auth FA]	WD40	e7qijFA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
E [auth EA]	WD40	e7qijEA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
D [auth DA]	WD40	e7qijDA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
C [auth CA]	WD40	e7qijCA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
B [auth BA]	WD40	e7qijBA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)
A [auth AA]	WD40	e7qijAA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: WD40	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], JA [auth PC], LA [auth EC], NA [auth FC], PA [auth HC], RA [auth IC], T [auth CC], TA [auth AC], V [auth JC], VA [auth BC], X [auth KC], XA [auth DC], Z [auth RC], ZA [auth MC]	Chaperone protein YscY	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm
AA [auth GB], AB [auth QB], CA [auth LB], EA [auth NB], GA [auth OB], AA [auth GB], AB [auth QB], CA [auth LB], EA [auth NB], GA [auth OB], IA [auth PB], KA [auth EB], MA [auth FB], OA [auth HB], QA [auth IB], S [auth CB], SA [auth AB], U [auth JB], UA [auth BB], W [auth KB], WA [auth DB], Y [auth RB], YA [auth MB]	Yop proteins translocation protein X	-	-	cellular anatomical structure extracellular region
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	Low calcium response locus protein D	-	establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], JA [auth PC], LA [auth EC], NA [auth FC], PA [auth HC], RA [auth IC], T [auth CC], TA [auth AC], V [auth JC], VA [auth BC], X [auth KC], XA [auth DC], Z [auth RC], ZA [auth MC]	IPR016684	Type III secretion system chaperone, YscY	Family
BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], BA [auth GC], BB [auth QC], DA [auth LC], FA [auth NC], HA [auth OC], JA [auth PC], LA [auth EC], NA [auth FC], PA [auth HC], RA [auth IC], T [auth CC], TA [auth AC], V [auth JC], VA [auth BC], X [auth KC], XA [auth DC], Z [auth RC], ZA [auth MC]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
AA [auth GB], AB [auth QB], CA [auth LB], EA [auth NB], GA [auth OB], AA [auth GB], AB [auth QB], CA [auth LB], EA [auth NB], GA [auth OB], IA [auth PB], KA [auth EB], MA [auth FB], OA [auth HB], QA [auth IB], S [auth CB], SA [auth AB], U [auth JB], UA [auth BB], W [auth KB], WA [auth DB], Y [auth RB], YA [auth MB]	IPR012672	Type III secretion apparatus assembly protein SctX	Family
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR042194	FHIPEP, domain 1	Homologous Superfamily
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR042196	FHIPEP, domain 4	Homologous Superfamily
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR001712	Type III secretion system FHIPEP	Family
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR042193	FHIPEP, domain 3	Homologous Superfamily
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR025505	FHIPEP conserved site	Conserved Site
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	IPR006302	Type III secretion protein HrcV	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA] A [auth AA], B [auth BA], C [auth CA], D [auth DA], E [auth EA], F [auth FA], G [auth GA], H [auth HA], I [auth IA], J [auth JA], K [auth KA], L [auth LA], M [auth MA], N [auth NA], O [auth OA], P [auth PA], Q [auth QA], R [auth RA]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type III Secretion Systems	Type III secretion export gate YscV with substrate:chaperone complex YscX:YscY

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.