7TGN

Crystal structure of DesD, the desferrioxamine synthetase from the Streptomyces violaceus salmycin biosynthetic pathway

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	RhbC	e7tgnA2	A: a+b two layers	X: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	H: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	T: N-terminal domain of alcaligin biosynthesis protein C	F: RhbC	ECOD (1.6)
A	IucA_IucC	e7tgnA1	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: IucA_IucC	ECOD (1.6)
B	RhbC	e7tgnB1	A: a+b two layers	X: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	H: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	T: N-terminal domain of alcaligin biosynthesis protein C	F: RhbC	ECOD (1.6)
B	IucA_IucC	e7tgnB2	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: IucA_IucC	ECOD (1.6)
C	RhbC	e7tgnC2	A: a+b two layers	X: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	H: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	T: N-terminal domain of alcaligin biosynthesis protein C	F: RhbC	ECOD (1.6)
C	IucA_IucC	e7tgnC1	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: IucA_IucC	ECOD (1.6)
D	RhbC	e7tgnD1	A: a+b two layers	X: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	H: N-terminal domain of alcaligin biosynthesis protein C (From Topology)	T: N-terminal domain of alcaligin biosynthesis protein C	F: RhbC	ECOD (1.6)
D	IucA_IucC	e7tgnD2	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: IucA_IucC	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF04183	IucA / IucC family (IucA_IucC)	IucA / IucC family	-	Family
A, B, C, D	PF06276	Ferric iron reductase FhuF-like transporter (FhuF)	Ferric iron reductase FhuF-like transporter	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Desferrioxamine synthetase DesD	acid-amino acid ligase activity catalytic activity ligase activity, forming carbon-nitrogen bonds ligase activity cation binding ion binding binding metal ion binding small molecule binding	siderophore biosynthetic process peptide biosynthetic process biosynthetic process secondary metabolite biosynthetic process siderophore metabolic process metabolic process cellular process nonribosomal peptide biosynthetic process peptide metabolic process secondary metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR022770	Aerobactin siderophore biosynthesis IucA/IucC-like, C-terminal	Domain
A, B, C, D	IPR037455	Aerobactin siderophore biosynthesis, IucA/IucC-like	Family
A, B, C, D	IPR007310	Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.