Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamilyt-snare proteins 8037582 3000366 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySNARE fusion complex 8079907 3001549 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySec1/munc18-like 8037630 3001920 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CSynaptobrevine7udcC1 A: extended segmentsX: Synaptobrevin (From Topology)H: Synaptobrevin (From Topology)T: SynaptobrevinF: SynaptobrevinECOD (1.6)
ASec1_3rde7udcA3 A: alpha complex topologyX: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology)H: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology)T: alpha-helical domain in sec1/munc18-like (SM) proteinsF: Sec1_3rdECOD (1.6)
ASec1_1st_1e7udcA1 A: a/b three-layered sandwichesX: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)H: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)T: Rossmann-like domains in Sec1/munc18-like proteinsF: Sec1_1st_1ECOD (1.6)
ASec1_2nde7udcA2 A: a/b three-layered sandwichesX: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)H: Rossmann-like domains in Sec1/munc18-like proteins (From Topology)T: Rossmann-like domains in Sec1/munc18-like proteinsF: Sec1_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05739SNARE domain (SNARE)SNARE domain- Family
PF00804Syntaxin (Syntaxin)SyntaxinSyntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal d ...Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms; in syntaxin 1A (Swiss:O35526) it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis, ER-Golgi transport and Golgi-endosome transport, for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins, Rab GTPases, and tethering factors [6].
Domain
PF00995Sec1 family (Sec1)Sec1 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Syntaxin-1A
Synaptobrevin-2
Syntaxin-binding protein 1