7WYI | pdb_00007wyi

Native Photosystem I of Chlamydomonas reinhardtii


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein 8105868 3000343 SCOP2B (2022-06-29)
H [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8094723 3000824 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8094180 3000813 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8094773 3000325 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhotosystem I subunit PsaD 8095071 3000951 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8093860 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094499 3000850 SCOP2B (2022-06-29)
O [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099928 3000343 SCOP2B (2022-06-29)
N [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099932 3000343 SCOP2B (2022-06-29)
M [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099934 3000343 SCOP2B (2022-06-29)
L [auth Z]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099102 3000343 SCOP2B (2022-06-29)
K [auth 8]SCOP2B SuperfamilyChlorophyll a-b binding protein 8099930 3000343 SCOP2B (2022-06-29)
J [auth 7]SCOP2B SuperfamilyChlorophyll a-b binding protein 8100068 3000343 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8094461 3000850 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth 3]V-sete7wyi31 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
H [auth 1]V-sete7wyi11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
G [auth J]V-sete7wyiJ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
FV-sete7wyiF1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
EV-sete7wyiE1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
DV-sete7wyiD1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
CV-sete7wyiC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
BV-sete7wyiB1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
O [auth 6]V-sete7wyi61 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
N [auth 5]V-sete7wyi51 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
M [auth 4]V-sete7wyi41 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
L [auth Z]V-sete7wyiZ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
K [auth 8]V-sete7wyi81 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
J [auth 7]V-sete7wyi71 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)
AV-sete7wyiA1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: V-setECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth 1]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
G [auth J]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
O [auth 6]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
N [auth 5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
M [auth 4]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
L [auth Z]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
K [auth 8]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
J [auth 7]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 3]Chlorophyll a-b binding protein, chloroplastic
H [auth 1]Chlorophyll a-b binding protein, chloroplastic
G [auth J]Photosystem I reaction center subunit IX-
Photosystem I reaction center subunit III, chloroplastic-
Photosystem I reaction center subunit IV, chloroplastic-
Photosystem I reaction center subunit II, chloroplastic-
Photosystem I iron-sulfur center
Photosystem I P700 chlorophyll a apoprotein A2
O [auth 6]Chlorophyll a-b binding protein, chloroplastic
N [auth 5]Chlorophyll a-b binding protein, chloroplastic
M [auth 4]Chlorophyll a-b binding protein, chloroplastic
L [auth Z]Chlorophyll a-b binding protein, chloroplastic
K [auth 8]Chlorophyll a-b binding protein, chloroplastic
J [auth 7]Chlorophyll a-b binding protein, chloroplastic
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth 3]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
I [auth 3]IPR022796Chlorophyll A-B binding proteinFamily
H [auth 1]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
H [auth 1]IPR022796Chlorophyll A-B binding proteinFamily
G [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
G [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
O [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
N [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
M [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
L [auth Z]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
L [auth Z]IPR022796Chlorophyll A-B binding proteinFamily
K [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
K [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
J [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
J [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage