7XKT | pdb_00007xkt

Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Rhabdo_ncap	e7xktL1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
K	Rhabdo_ncap	e7xktK1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
J	Rhabdo_ncap	e7xktJ1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
I	Rhabdo_ncap	e7xktI1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
H	Rhabdo_ncap	e7xktH1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
G	Rhabdo_ncap	e7xktG1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
F	Rhabdo_ncap	e7xktF1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
E	Rhabdo_ncap	e7xktE1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
D	Rhabdo_ncap	e7xktD1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
C	Rhabdo_ncap	e7xktC1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
B	Rhabdo_ncap	e7xktB1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)
A	Rhabdo_ncap	e7xktA1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Rhabdo_ncap	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Gap junction delta-2 protein,Soluble cytochrome b562	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity gap junction channel activity transmembrane transporter activity	electron transport chain metabolic process cellular process generation of precursor metabolites and energy multicellular organismal process system process nervous system process biological regulation action potential transmission of nerve impulse cell communication neuronal action potential regulation of biological quality regulation of membrane potential electron transport chain metabolic process cellular process generation of precursor metabolites and energy multicellular organismal process system process nervous system process biological regulation action potential transmission of nerve impulse cell communication neuronal action potential regulation of biological quality regulation of membrane potential trans-synaptic signaling synaptic signaling regulation of biological process signaling anterograde trans-synaptic signaling cell-cell signaling chemical synaptic transmission sensory perception of light stimulus sensory perception visual perception	cellular anatomical structure periplasmic space cell-cell junction protein-containing complex anchoring junction plasma membrane protein complex gap junction membrane plasma membrane membrane protein complex cell periphery cell junction connexin complex synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR010980	Cytochrome c/b562	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR009155	Cytochrome b562	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR038359	Connexin, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000500	Connexin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR019570	Connexin, cysteine-rich domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR013092	Connexin, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR002260	Gap junction delta-2 protein (Cx36)	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR017990	Connexin, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Pharos: Q9UKL4	myopia Ametropia lung carcinoma osteosarcoma refractive error facioscapulohumeral muscular dystrophy malignant glioma ovarian cancer large cell medulloblastoma psoriasis schizophrenia

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	OPM	Transmembrane	Alpha-helical polytopic	Tetraspan junctional complexes	Connexin

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Channels: Gap Junctions and Related Channels	Connexin 36 (Cx36; GJD2) gap junction channel in detergents

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.