Annotations: 7XUT

Crystal structure of RPA70N-WRN fusion

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Nucleic acid-binding proteins	8037540	3000135	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nucleic acid-binding proteins	8037540	3000135	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MIF4G	e7xutB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
A		e7xutA1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F:	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (utative)
A	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF04057	Replication factor-A protein 1, N-terminal domain (Rep-A_N)	Replication factor-A protein 1, N-terminal domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	fusion protein of Replication protein A 70 kDa DNA-binding subunit and Werner syndrome ATP-dependent helicase	chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity chromatin binding binding DNA binding damaged DNA binding nucleic acid binding sequence-specific DNA binding G-rich strand telomeric DNA binding sequence-specific single stranded DNA binding single-stranded telomeric DNA binding single-stranded DNA binding telomeric repeat DNA binding chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity chromatin binding binding DNA binding damaged DNA binding nucleic acid binding sequence-specific DNA binding G-rich strand telomeric DNA binding sequence-specific single stranded DNA binding single-stranded telomeric DNA binding single-stranded DNA binding telomeric repeat DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding manganese ion binding nucleic acid conformation isomerase activity forked DNA-dependent helicase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity macromolecular conformation isomerase activity telomeric G-quadruplex DNA binding G-quadruplex DNA binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding hydrolase activity, acting on ester bonds nuclease activity 3'-5' exonuclease activity hydrolase activity exonuclease activity protein-containing complex binding DNA secondary structure binding four-way junction DNA binding 3'-5' DNA helicase activity bubble DNA binding Y-form DNA binding mismatch repair complex binding MutLalpha complex binding magnesium ion binding flap-structured DNA binding 3'-flap-structured DNA binding identical protein binding protein binding protein homodimerization activity protein dimerization activity oxidized DNA binding oxidized purine DNA binding 8-hydroxy-2'-deoxyguanosine DNA binding telomeric D-loop binding D-loop DNA binding four-way junction helicase activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process DNA replication metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process localization cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process DNA replication metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process localization protein localization to chromosome protein localization to organelle macromolecule localization intracellular protein localization telomere maintenance via telomerase telomere organization chromosome organization nucleobase-containing compound biosynthetic process macromolecule biosynthetic process RNA-templated DNA biosynthetic process telomere maintenance via telomere lengthening telomere maintenance cellular component organization nucleic acid biosynthetic process organelle organization biosynthetic process cellular component organization or biogenesis DNA biosynthetic process multicellular organismal process multicellular organismal-level homeostasis homeostatic process homeostasis of number of cells within a tissue anatomical structure homeostasis tissue homeostasis homeostasis of number of cells mismatch repair DNA repair DNA-templated DNA replication protein localization to site of double-strand break developmental process cellular developmental process hemopoiesis cell differentiation anatomical structure development cell development DNA recombination multicellular organism development embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development regulation of biological process cell population proliferation regulation of cellular process positive regulation of cell population proliferation regulation of cell population proliferation biological regulation positive regulation of biological process positive regulation of cellular process double-strand break repair recombinational repair double-strand break repair via homologous recombination base-excision repair nucleotide-excision repair sexual reproduction reproductive process meiotic cell cycle cell cycle DNA-templated DNA replication maintenance of fidelity replication fork processing DNA geometric change DNA conformation change replicative senescence cell cycle process formation of extrachromosomal circular DNA cellular component biogenesis cellular component assembly telomere maintenance via telomere trimming t-circle formation cellular senescence positive regulation of strand invasion regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of strand invasion regulation of macromolecule metabolic process DNA strand invasion positive regulation of DNA metabolic process regulation of metabolic process regulation of DNA metabolic process cellular response to nutrient levels response to nutrient levels response to starvation cellular response to starvation cellular response to ionizing radiation cellular response to radiation cellular response to environmental stimulus response to ionizing radiation cellular response to gamma radiation response to radiation response to abiotic stimulus cellular response to abiotic stimulus response to gamma radiation protein localization to nucleolus protein localization to nucleus telomeric loop disassembly telomeric D-loop disassembly determination of adult lifespan nuclear DNA replication cell cycle DNA replication telomere maintenance via semi-conservative replication response to oxidative stress DNA synthesis involved in DNA repair response to light stimulus response to UV-C response to UV positive regulation of molecular function regulation of molecular function positive regulation of hydrolase activity regulation of catalytic activity regulation of hydrolase activity positive regulation of catalytic activity regulation of growth growth regulation of growth rate	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome chromosome intracellular organelle lumen intracellular organelle cellular anatomical structure nuclear replisome membraneless organelle replication fork membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome chromosome intracellular organelle lumen intracellular organelle cellular anatomical structure nuclear replisome membraneless organelle replication fork DNA replication factor A complex protein-DNA complex nuclear replication fork intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle nuclear lumen replisome nucleoplasm condensed nuclear chromosome lateral element synaptonemal structure synaptonemal complex condensed chromosome male germ cell nucleus germ cell nucleus site of double-strand break site of DNA damage chromosome, telomeric region chromosomal region nuclear body PML body nuclear speck ribonucleoprotein granule supramolecular complex nuclear ribonucleoprotein granule cytoplasm nucleolus centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR007199	Replication factor-A protein 1, N-terminal	Domain
A, B	IPR047192	Replication factor A, C-terminal, eukaryotes	Domain
A, B	IPR013955	Replication factor A, C-terminal	Domain
A, B	IPR031657	Replication protein A, OB domain	Domain
A, B	IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Domain
A, B	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
A, B	IPR004591	Replication factor A protein 1	Family
A, B	IPR036397	Ribonuclease H superfamily	Homologous Superfamily
A, B	IPR002121	HRDC domain	Domain
A, B	IPR011545	DEAD/DEAH-box helicase domain	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR010997	HRDC-like superfamily	Homologous Superfamily
A, B	IPR001650	Helicase, C-terminal domain-like	Domain
A, B	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A, B	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A, B	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A, B	IPR029491	Helicase Helix-turn-helix domain	Domain
A, B	IPR004589	DNA helicase, ATP-dependent, RecQ type	Family
A, B	IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	Domain
A, B	IPR012337	Ribonuclease H-like superfamily	Homologous Superfamily
A, B	IPR002562	3'-5' exonuclease domain	Domain
A, B	IPR018982	RQC domain	Domain
A, B	IPR044876	HRDC domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q14191	Chloracne astrocytic tumor breast cancer glioblastoma malignant ependymoma ovarian cancer atypical teratoid rhabdoid tumor Hodgkins lymphoma malignant mesothelioma psoriasis B-cell chronic lymphocytic leukemia dermatomyositis lymphoplasmacytic lymphoma medulloblastoma Werner syndrome Chloracne astrocytic tumor breast cancer glioblastoma malignant ependymoma ovarian cancer atypical teratoid rhabdoid tumor Hodgkins lymphoma malignant mesothelioma psoriasis B-cell chronic lymphocytic leukemia dermatomyositis lymphoplasmacytic lymphoma medulloblastoma Werner syndrome colorectal cancer osteosarcoma premature aging syndrome thyroid gland carcinoma Bloom syndrome Hutchinson-Gilford progeria syndrome lung cancer metabolic syndrome X peripheral nervous system disease prostate cancer cancer diabetes mellitus intellectual disability medulloblastoma osteogenesis imperfecta peripheral neuropathy psoriasis cataract DNA repair disease large cell medulloblastoma meningioma