7Y8A | pdb_00007y8a

Cryo-EM structure of cryptophyte photosystem I


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth 5]Iso_dhe7y8a51 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
M [auth D]Iso_dhe7y8aD1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
N [auth E]Iso_dhe7y8aE1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
H [auth 8]Iso_dhe7y8a81 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
G [auth 7]Iso_dhe7y8a71 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
F [auth 6]Iso_dhe7y8a61 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
D [auth 4]Iso_dhe7y8a41 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
C [auth 3]Iso_dhe7y8a31 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
Z [auth b]Iso_dhe7y8ab1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
Y [auth a]Iso_dhe7y8aa1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
T [auth M]Iso_dhe7y8aM1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
B [auth 2]Iso_dhe7y8a21 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
S [auth L]Iso_dhe7y8aL1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
R [auth K]Iso_dhe7y8aK1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
Q [auth J]Iso_dhe7y8aJ1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
P [auth I]Iso_dhe7y8aI1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
O [auth F]Iso_dhe7y8aF1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
L [auth C]Iso_dhe7y8aC1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
K [auth B]Iso_dhe7y8aB1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
J [auth A]Iso_dhe7y8aA1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)
A [auth 1]Iso_dhe7y8a11 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Iso_dhECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
S [auth L]1.20.1240.10 Mainly Alpha Up-down Bundle Photosystem 1 Reaction Centre Subunit Xi Chain: LCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth 5]ACPI-5---
M [auth D]Photosystem I reaction center subunit II-
N [auth E]Photosystem I reaction center subunit IV-
V [auth R]PsaR---
I [auth 9]ACPI-12---
H [auth 8]ACPI-8---
G [auth 7]ACPI-7---
F [auth 6]ACPI-6---
D [auth 4]ACPI-4---
C [auth 3]ACPI-3---
Z [auth b]ACPI-14---
Y [auth a]ACPI-13---
X [auth Z]ACPI-S---
W [auth X]Unk1---
U [auth O]PsaO---
T [auth M]Photosystem I reaction center subunit XII-
B [auth 2]ACPI-2---
S [auth L]Photosystem I reaction center subunit XI-
R [auth K]Photosystem I reaction center subunit PsaK-
Q [auth J]Photosystem I reaction center subunit IX-
P [auth I]Photosystem I reaction center subunit VIII-
O [auth F]Photosystem I reaction center subunit III-
L [auth C]Photosystem I iron-sulfur center
K [auth B]Photosystem I P700 chlorophyll a apoprotein A2
J [auth A]Photosystem I P700 chlorophyll a apoprotein A1
A [auth 1]ACPI-1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M [auth D]IPR003685Photosystem I PsaDFamily
M [auth D]IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
N [auth E]IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
N [auth E]IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
T [auth M]IPR010010Photosystem I PsaM, reaction centreFamily
T [auth M]IPR037279Photosystem I PsaM, reaction centre superfamilyHomologous Superfamily
S [auth L]IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
S [auth L]IPR022980Photosystem I, reaction centre subunit XIFamily
S [auth L]IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
R [auth K]IPR037101Photosystem I reaction centre subunit PsaKHomologous Superfamily
R [auth K]IPR000549Photosystem I reaction center subunit V/PsaKFamily
R [auth K]IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
R [auth K]IPR017492Photosystem I reaction center subunit PsaKFamily
Q [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
Q [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
P [auth I]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
P [auth I]IPR001302Photosystem I reaction centre subunit VIIIFamily
O [auth F]IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
O [auth F]IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
L [auth C]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
L [auth C]IPR050157Photosystem I iron-sulfur centerFamily
L [auth C]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
L [auth C]IPR017491Photosystem I protein PsaCFamily
K [auth B]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
K [auth B]IPR001280Photosystem I PsaA/PsaBFamily
K [auth B]IPR006244Photosystem I PsaBFamily
K [auth B]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
J [auth A]IPR006243Photosystem I PsaAFamily
J [auth A]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
J [auth A]IPR001280Photosystem I PsaA/PsaBFamily
J [auth A]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site