Annotations: 7YG0

Cryo-EM structure of human sodium-chloride cotransporter

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MIF4G	e7yg0B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
A	MIF4G	e7yg0A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03522	Solute carrier family 12 (SLC12)	Solute carrier family 12	-	Family
A, B	PF00324	Amino acid permease (AA_permease)	Amino acid permease		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Solute carrier family 12 member 3	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity monoatomic anion:sodium symporter activity sodium ion transmembrane transporter activity sodium:chloride symporter activity monoatomic anion:monoatomic cation symporter activity secondary active transmembrane transporter activity chloride:monoatomic cation symporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity symporter activity potassium ion transmembrane transporter activity sodium:potassium:chloride symporter activity potassium:sodium symporter activity potassium:chloride symporter activity	transport monoatomic ion transmembrane transport establishment of localization chloride transport transmembrane transport localization chloride transmembrane transport monoatomic anion transport monoatomic anion transmembrane transport monoatomic ion transport cellular process inorganic anion transport regulation of cellular component size homeostatic process transport monoatomic ion transmembrane transport establishment of localization chloride transport transmembrane transport localization chloride transmembrane transport monoatomic anion transport monoatomic anion transmembrane transport monoatomic ion transport cellular process inorganic anion transport regulation of cellular component size homeostatic process cell volume homeostasis biological regulation cellular component organization cellular homeostasis cellular component organization or biogenesis regulation of biological quality regulation of cell size regulation of anatomical structure size inorganic ion homeostasis chemical homeostasis monoatomic ion homeostasis chloride ion homeostasis monoatomic anion homeostasis sodium ion transmembrane transport metal ion transport monoatomic cation transmembrane transport monoatomic cation transport sodium ion transport response to stimulus response to chemical response to salt potassium ion homeostasis monoatomic cation homeostasis response to aldosterone response to ketone response to lipid response to endogenous stimulus response to alcohol response to oxygen-containing compound response to mineralocorticoid response to corticosteroid response to hormone response to steroid hormone import into cell import across plasma membrane potassium ion transmembrane transport inorganic cation import across plasma membrane inorganic ion import across plasma membrane potassium ion transport potassium ion import across plasma membrane sodium ion homeostasis multicellular organismal process renal system process system process renal sodium ion transport renal absorption renal sodium ion absorption	cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle cellular anatomical structure membrane cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004841	Amino acid permease/SLC12A domain	Domain
A, B	IPR013612	Amino acid permease, N-terminal	Domain
A, B	IPR004842	SLC12A transporter family	Family
A, B	IPR018491	SLC12A transporter, C-terminal	Domain
A, B	IPR002948	Thiazide-sensitive Na-K-Cl co-transporter	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: P55017	Gitelman syndrome hypertensive disorder vascular disease kidney disease Renal Disease with Edema wet macular degeneration age-related macular degeneration malignant mesothelioma ovarian cancer psoriasis renal tubular acidosis heart disease metabolic syndrome X cutaneous lupus erythematosus osteosarcoma Gitelman syndrome hypertensive disorder vascular disease kidney disease Renal Disease with Edema wet macular degeneration age-related macular degeneration malignant mesothelioma ovarian cancer psoriasis renal tubular acidosis heart disease metabolic syndrome X cutaneous lupus erythematosus osteosarcoma potassium deficiency disease

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Transmembrane	Alpha-helical polytopic	APC (Amino acid-Polyamine-organoCation) superfamily	Cation-chloride cotransporter

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Amino Acid/Polyamine/Organocation (APC) Superfamily	NCC sodium-chloride cotransporter (SLC12 superfamily), full length

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.