7ZUF | pdb_00007zuf

Saccharomyces cerevisiae L-BC virus, open particle, C5 reconstruction

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
V	Ribosomal_L27A, Ribosomal_L18	e7zufV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
U	Ribosomal_L27A, Ribosomal_L18	e7zufU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
T	Ribosomal_L27A, Ribosomal_L18	e7zufT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
S [auth K]	Ribosomal_L27A, Ribosomal_L18	e7zufK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
R [auth S]	Ribosomal_L27A, Ribosomal_L18	e7zufS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
Q [auth J]	Ribosomal_L27A, Ribosomal_L18	e7zufJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
P [auth R]	Ribosomal_L27A, Ribosomal_L18	e7zufR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
O [auth I]	Ribosomal_L27A, Ribosomal_L18	e7zufI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
N [auth Q]	Ribosomal_L27A, Ribosomal_L18	e7zufQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
M [auth H]	Ribosomal_L27A, Ribosomal_L18	e7zufH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
L [auth P]	Ribosomal_L27A, Ribosomal_L18	e7zufP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
K [auth G]	Ribosomal_L27A, Ribosomal_L18	e7zufG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
J [auth O]	Ribosomal_L27A, Ribosomal_L18	e7zufO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
I [auth F]	Ribosomal_L27A, Ribosomal_L18	e7zufF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
H [auth N]	Ribosomal_L27A, Ribosomal_L18	e7zufN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
G [auth E]	Ribosomal_L27A, Ribosomal_L18	e7zufE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
F [auth D]	Ribosomal_L27A, Ribosomal_L18	e7zufD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
E [auth M]	Ribosomal_L27A, Ribosomal_L18	e7zufM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
D [auth C]	Ribosomal_L27A, Ribosomal_L18	e7zufC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
C [auth L]	Ribosomal_L27A, Ribosomal_L18	e7zufL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
B [auth A]	Ribosomal_L27A, Ribosomal_L18	e7zufA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
A [auth B]	Ribosomal_L27A, Ribosomal_L18	e7zufB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], F [auth D], G [auth E], H [auth N], I [auth F], J [auth O], K [auth G], L [auth P], M [auth H], N [auth Q], O [auth I], P [auth R], Q [auth J], R [auth S], S [auth K], T, U, V	PF09220	L-A virus, major coat protein (LA-virus_coat)	L-A virus, major coat protein	Members of this family form the major coat protein of the Saccharomyces cerevisiae L-A virus [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], F [auth D], G [auth E], H [auth N], I [auth F], J [auth O], K [auth G], L [auth P], M [auth H], N [auth Q], O [auth I], P [auth R], Q [auth J], R [auth S], S [auth K], T, U, V	Major capsid protein	RNA binding binding nucleic acid binding	viral gene expression viral process viral translational frameshifting viral translation	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], F [auth D], G [auth E], H [auth N], I [auth F], J [auth O], K [auth G], L [auth P], M [auth H], N [auth Q], O [auth I], P [auth R], Q [auth J], R [auth S], S [auth K], T, U, V	IPR036332	L-A virus major coat protein superfamily	Homologous Superfamily
A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], A [auth B], B [auth A], C [auth L], D [auth C], E [auth M], F [auth D], G [auth E], H [auth N], I [auth F], J [auth O], K [auth G], L [auth P], M [auth H], N [auth Q], O [auth I], P [auth R], Q [auth J], R [auth S], S [auth K], T, U, V	IPR015302	Major coat protein, L-A virus	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.