8APK | pdb_00008apk

rotational state 3 of the Trypanosoma brucei mitochondrial ATP synthase dimer


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GA [auth O1]e8apkO11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
HA [auth P1]e8apkP11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
IA [auth Q1]e8apkQ11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
JA [auth R1]e8apkR11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
KA [auth S1]e8apkS11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
LA [auth T1]e8apkT11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
MA [auth U1]e8apkU11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
NA [auth V1]e8apkV11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
OA [auth W1]e8apkW11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
PA [auth X1]e8apkX11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
CA [auth J1]e8apkJ11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
DA [auth K1]e8apkK11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
EA [auth L1]e8apkL11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
BA [auth I1]e8apkI11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
AA [auth H1]e8apkH11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
Z [auth G1]e8apkG11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
W [auth D1]e8apkD11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
X [auth E1]e8apkE11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
Y [auth F1]e8apkF11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
T [auth A1]e8apkA11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
U [auth B1]e8apkB11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)
V [auth C1]e8apkC11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: F5_F8_type_CF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
FA [auth M1]PF00213ATP synthase delta (OSCP) subunit (OSCP)ATP synthase delta (OSCP) subunit- Family
AA [auth H1]PF02823ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N)ATP synthase, Delta/Epsilon chain, beta-sandwich domainPart of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ...Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth h]ATPTB4- -
H [auth g]ATPTB3- - -
G [auth f]subunit-f- -
F [auth e]ATPTB1- -
E [auth d]subunit-d- -
D [auth c]subunit-8- -
C [auth a]ATP synthase subunit a-
ATPase subunit 9, putative
FA [auth M1]OSCP
CA [auth J1],
DA [auth K1],
EA [auth L1]
ATP synthase subunit p18, mitochondrial-
BA [auth I1]ATP synthase subunit epsilon, mitochondrial -
AA [auth H1]ATP synthase, epsilon chain, putative
Z [auth G1]ATP synthase gamma subunit -
B [auth M],
N [auth m]
subunit-g- - -
W [auth D1],
X [auth E1],
Y [auth F1]
ATP synthase subunit beta, mitochondrial
T [auth A1],
U [auth B1],
V [auth C1]
ATP synthase subunit alpha, mitochondrial -
S [auth r]ATPEG4---
R [auth q]ATPEG3- -
Q [auth p]subunit-b- - -
P [auth o]ATPTB12- -
O [auth n]ATPTB11- -
L [auth k]subunit-k- -
K [auth j]ATPTB6- - -
J [auth i]subunit-i/j- -
A [auth L],
M [auth l]
subunit-e- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
FA [auth M1]IPR000711ATPase, OSCP/delta subunitFamily
FA [auth M1]IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyHomologous Superfamily
CA [auth J1],
DA [auth K1],
EA [auth L1]
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
BA [auth I1]IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialHomologous Superfamily
BA [auth I1]IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialFamily
AA [auth H1]IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalHomologous Superfamily
AA [auth H1]IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalDomain
AA [auth H1]IPR001469ATP synthase, F1 complex, delta/epsilon subunitFamily
Z [auth G1]IPR000131ATP synthase, F1 complex, gamma subunitFamily
Z [auth G1]IPR035968ATP synthase, F1 complex, gamma subunit superfamilyHomologous Superfamily
W [auth D1],
X [auth E1],
Y [auth F1]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
W [auth D1],
X [auth E1],
Y [auth F1]
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
W [auth D1],
X [auth E1],
Y [auth F1]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
W [auth D1],
X [auth E1],
Y [auth F1]
IPR050053ATPase alpha/beta chainsFamily
W [auth D1],
X [auth E1],
Y [auth F1]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
W [auth D1],
X [auth E1],
Y [auth F1]
IPR055190ATP synthase A/B type, C-terminal domainDomain
W [auth D1],
X [auth E1],
Y [auth F1]
IPR003593AAA+ ATPase domainDomain
W [auth D1],
X [auth E1],
Y [auth F1]
IPR005722ATP synthase, F1 complex, beta subunitFamily
W [auth D1],
X [auth E1],
Y [auth F1]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
T [auth A1],
U [auth B1],
V [auth C1]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
T [auth A1],
U [auth B1],
V [auth C1]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
T [auth A1],
U [auth B1],
V [auth C1]
IPR005294ATP synthase, F1 complex, alpha subunitFamily
T [auth A1],
U [auth B1],
V [auth C1]
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
T [auth A1],
U [auth B1],
V [auth C1]
IPR000793ATP synthase, alpha subunit, C-terminalDomain
T [auth A1],
U [auth B1],
V [auth C1]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily