Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth A]SCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2021-05-27)
D [auth A]SCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
D [auth A]SCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
A [auth D]SCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
A [auth D]SCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2021-05-27)
A [auth D]SCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2021-05-27)
B [auth E]SCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2021-05-27)
E [auth B]SCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyProtein kinase-like (PK-like)8062460 3000066 SCOP2B (2021-05-27)
C [auth F]SCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2021-05-27)
C [auth F]SCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2021-05-27)
F [auth C]SCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2021-05-27)
F [auth C]SCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2021-05-27)
ISCOP2B SuperfamilyCyclin-like8034370 3000768 SCOP2B (2021-05-27)
ISCOP2B SuperfamilyCyclin-like8034372 3000768 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth A]PF03178,PF10433e8busA3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
D [auth A]PF10433e8busA2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
D [auth A]PF03178e8busA1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
GPF03178,PF10433e8busG1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
GPF10433e8busG3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
GPF03178e8busG2 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
A [auth D]PF03178,PF10433e8busD2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
A [auth D]PF10433e8busD1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
A [auth D]PF03178e8busD3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
B [auth E]PF00069e8busE1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
E [auth B]PF00069e8busB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
HPF00069e8busH1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
C [auth F]PF00134e8busF2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
C [auth F]PF21797e8busF1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)
F [auth C]PF00134e8busC2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
F [auth C]PF21797e8busC1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)
IPF00134e8busI1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF00134ECOD (1.6)
IPF21797e8busI2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: PF21797ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth D],
D [auth A],
G
PF10433Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N)Mono-functional DNA-alkylating methyl methanesulfonate N-term- Repeat
A [auth D],
D [auth A],
G
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
B [auth E],
E [auth B],
H
PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain
C [auth F],
F [auth C],
I
PF00134Cyclin, N-terminal domain (Cyclin_N)Cyclin, N-terminal domainCyclins regulate cyclin dependent kinases (CDKs). Swiss:P22674 is a Uracil-DNA glycosylase that is related to other cyclins [4]. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the N-terminal domain.Domain
C [auth F],
F [auth C],
I
PF21797Cyclin-T2-like, C-terminal domain (CycT2-like_C)Cyclin-T2-like, C-terminal domainThis domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P ...This domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P-TEFB). This domain adopts s cyclin box fold consisting of five helices and a short C-terminal helix [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D],
D [auth A],
G
DNA damage-binding protein 1
B [auth E],
E [auth B],
H
Cyclin-dependent kinase 12
C [auth F],
F [auth C],
I
Cyclin-K

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth E],
E [auth B],
H
TPO Parent Component: THR

RESIDAA0038

PSI-MOD :  O-phospho-L-threonine MOD:00047