8DEJ | pdb_00008dej

D. vulgaris type I-C Cascade bound to dsDNA target


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HCas_Cas7e8dejH1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
GCas_Cas7e8dejG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
FCas_Cas7e8dejF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
ECas_Cas7e8dejE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
DCas_Cas7e8dejD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
CCas_Cas7e8dejC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
BCas_Cas7e8dejB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)
ACas_Cas7e8dejA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09709CRISPR-associated protein (Cas_Csd1) (Cas_Csd1)CRISPR-associated protein (Cas_Csd1)- Family
B, C, D, E, F
PF05107CRISPR-associated protein Cas7 (Cas_Cas7)CRISPR-associated protein Cas7- Family
PF09704CRISPR-associated protein (Cas_Cas5) (Cas_Cas5d)CRISPR-associated protein (Cas_Cas5)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (48-MER)---
DNA (40-MER)---
RNA (47-MER)---
J, K
CRISPR-associated protein, CT1133 family- - -
CRISPR-associated protein, CT1133 family- - -
B, C, D, E, F
CRISPR-associated protein, TM1801 family- -
pre-crRNA processing endonuclease -