8E7S
III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040292 | 3001831 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040294 | 3001831 | SCOP2B (2022-06-29) |
W [auth a] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040294 | 3001831 | SCOP2B (2022-06-29) |
W [auth a] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040292 | 3001831 | SCOP2B (2022-06-29) |
FA [auth k] | SCOP2B Superfamily | Cytochrome c oxidase subunit I-like | 8095115 | 3000653 | SCOP2B (2022-06-29) |
J [auth K] | SCOP2B Superfamily | Cytochrome c oxidase subunit I-like | 8095115 | 3000653 | SCOP2B (2022-06-29) |
GA [auth l] | SCOP2B Superfamily | Cytochrome c | 8040304 | 3000815 | SCOP2B (2022-06-29) |
GA [auth l] | SCOP2B Superfamily | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor | 8040305 | 3000762 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | Cytochrome c | 8040304 | 3000815 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor | 8040305 | 3000762 | SCOP2B (2022-06-29) |
JA [auth o] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8095567 | 3000671 | SCOP2B (2022-06-29) |
N [auth O] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8095567 | 3000671 | SCOP2B (2022-06-29) |
P [auth Q] | SCOP2B Superfamily | Cytochrome c oxidase subunit E | 8095803 | 3001402 | SCOP2B (2022-06-29) |
LA [auth q] | SCOP2B Superfamily | Cytochrome c oxidase subunit E | 8095803 | 3001402 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040300 | 3001831 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040297 | 3001831 | SCOP2B (2022-06-29) |
X [auth b] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040300 | 3001831 | SCOP2B (2022-06-29) |
X [auth b] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8040297 | 3001831 | SCOP2B (2022-06-29) |
PA [auth u] | SCOP2B Superfamily | Cytochrome c oxidase subunit h | 8095569 | 3000395 | SCOP2B (2022-06-29) |
T [auth U] | SCOP2B Superfamily | Cytochrome c oxidase subunit h | 8095569 | 3000395 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ISP transmembrane anchor | 8040308 | 3000753 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ISP domain | 8040307 | 3000233 | SCOP2B (2022-06-29) |
Y [auth c] | SCOP2B Superfamily | ISP transmembrane anchor | 8040308 | 3000753 | SCOP2B (2022-06-29) |
Y [auth c] | SCOP2B Superfamily | ISP domain | 8040307 | 3000233 | SCOP2B (2022-06-29) |
AA [auth e] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040319 | 3000779 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040319 | 3000779 | SCOP2B (2022-06-29) |
BA [auth f] | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040315 | 3000797 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040315 | 3000797 | SCOP2B (2022-06-29) |
CA [auth g] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040312 | 3000806 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040312 | 3000806 | SCOP2B (2022-06-29) |
DA [auth h] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040318 | 3000770 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040318 | 3000770 | SCOP2B (2022-06-29) |
EA [auth j] | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040299 | 3000966 | SCOP2B (2022-06-29) |
EA [auth j] | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8040302 | 3000517 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8040299 | 3000966 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8040302 | 3000517 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, W [auth a] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
A, W [auth a] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
FA [auth k], J [auth K] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
GA [auth l], K [auth L] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
HA [auth m], L [auth M] | PF02935 | Cytochrome c oxidase subunit VIIc (COX7C) | Cytochrome c oxidase subunit VIIc | - | Family |
IA [auth n], M [auth N] | PF02238 | Cytochrome c oxidase subunit VII (COX7a) | Cytochrome c oxidase subunit VII | - | Family |
JA [auth o], N [auth O] | PF00510 | Cytochrome c oxidase subunit III (COX3) | Cytochrome c oxidase subunit III | - | Family |
KA [auth p], O [auth P] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | - | Domain |
KA [auth p], O [auth P] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
LA [auth q], P [auth Q] | PF02284 | Cytochrome c oxidase subunit Va (COX5A) | Cytochrome c oxidase subunit Va | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va. | Domain |
NA [auth s], R [auth S] | PF02046 | Cytochrome c oxidase subunit VIa (COX6A) | Cytochrome c oxidase subunit VIa | - | Family |
OA [auth t], S [auth T] | PF01215 | Cytochrome c oxidase subunit Vb (COX5B) | Cytochrome c oxidase subunit Vb | - | Domain |
B, X [auth b] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
PA [auth u], T [auth U] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
RA [auth w], V [auth W] | PF02936 | Cytochrome c oxidase subunit IV (COX4) | Cytochrome c oxidase subunit IV | - | Family |
C, Y [auth c] | PF02921 | Ubiquinol cytochrome reductase transmembrane region (UCR_TM) | Ubiquinol cytochrome reductase transmembrane region | - | Family |
C, Y [auth c] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
D, Z [auth d] | PF09796 | Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10) | Ubiquinol-cytochrome-c reductase complex subunit (QCR10) | - | Family |
AA [auth e], E | PF05365 | Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9) | Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like | - | Family |
BA [auth f], F | PF02271 | Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD) | Ubiquinol-cytochrome C reductase complex 14kD subunit | - | Family |
CA [auth g], G | PF02320 | Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge) | Ubiquinol-cytochrome C reductase hinge protein | - | Family |
DA [auth h], H | PF02939 | UcrQ family (UcrQ) | UcrQ family | - | Family |
EA [auth j], I [auth J] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | - | Domain |
EA [auth j], I [auth J] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex IV (cytochrome c oxidase) | Respiratory supercomplexes III-IV |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |