Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
W [auth a]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
W [auth a]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
FA [auth k]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8095115 3000653 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8095115 3000653 SCOP2B (2022-06-29)
GA [auth l]SCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
GA [auth l]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
JA [auth o]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like8095567 3000671 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like8095567 3000671 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyCytochrome c oxidase subunit E8095803 3001402 SCOP2B (2022-06-29)
LA [auth q]SCOP2B SuperfamilyCytochrome c oxidase subunit E8095803 3001402 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
X [auth b]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
X [auth b]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
PA [auth u]SCOP2B SuperfamilyCytochrome c oxidase subunit h8095569 3000395 SCOP2B (2022-06-29)
T [auth U]SCOP2B SuperfamilyCytochrome c oxidase subunit h8095569 3000395 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
Y [auth c]SCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
Y [auth c]SCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
AA [auth e]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)
BA [auth f]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
FSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
CA [auth g]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
DA [auth h]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
EA [auth j]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
EA [auth j]SCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)
I [auth J]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
W [auth a]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A,
W [auth a]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
FA [auth k],
J [auth K]
PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
GA [auth l],
K [auth L]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
HA [auth m],
L [auth M]
PF02935Cytochrome c oxidase subunit VIIc (COX7C)Cytochrome c oxidase subunit VIIc- Family
IA [auth n],
M [auth N]
PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
JA [auth o],
N [auth O]
PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit III- Family
KA [auth p],
O [auth P]
PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
KA [auth p],
O [auth P]
PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
LA [auth q],
P [auth Q]
PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va.Domain
NA [auth s],
R [auth S]
PF02046Cytochrome c oxidase subunit VIa (COX6A)Cytochrome c oxidase subunit VIa- Family
OA [auth t],
S [auth T]
PF01215Cytochrome c oxidase subunit Vb (COX5B)Cytochrome c oxidase subunit Vb- Domain
B,
X [auth b]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
PA [auth u],
T [auth U]
PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase.Domain
RA [auth w],
V [auth W]
PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family
C,
Y [auth c]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
C,
Y [auth c]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
D,
Z [auth d]
PF09796Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10)Ubiquinol-cytochrome-c reductase complex subunit (QCR10)- Family
AA [auth e],
E
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
BA [auth f],
F
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
CA [auth g],
G
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
DA [auth h],
H
PF02939UcrQ family (UcrQ)UcrQ family- Family
EA [auth j],
I [auth J]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
EA [auth j],
I [auth J]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
W [auth a]
Cytochrome b-c1 complex subunit 1, mitochondrial
FA [auth k],
J [auth K]
Cytochrome c oxidase subunit 1
GA [auth l],
K [auth L]
Cytochrome c1, heme protein, mitochondrial
HA [auth m],
L [auth M]
Cytochrome c oxidase subunit 8, mitochondrial
IA [auth n],
M [auth N]
Cytochrome c oxidase subunit 7, mitochondrial
JA [auth o],
N [auth O]
Cytochrome c oxidase subunit 3
KA [auth p],
O [auth P]
Cytochrome c oxidase subunit 2
LA [auth q],
P [auth Q]
Cytochrome c oxidase subunit 6, mitochondrial
MA [auth r],
Q [auth R]
Cytochrome c oxidase subunit 9, mitochondrial
NA [auth s],
R [auth S]
Cytochrome c oxidase subunit 13, mitochondrial
OA [auth t],
S [auth T]
Cytochrome c oxidase subunit 4, mitochondrial
B,
X [auth b]
Cytochrome b-c1 complex subunit 2, mitochondrial
PA [auth u],
T [auth U]
Cytochrome c oxidase subunit 12, mitochondrial
QA [auth v],
U [auth V]
Cytochrome c oxidase subunit 26, mitochondrial- -
RA [auth w],
V [auth W]
Cytochrome c oxidase subunit 5A, mitochondrial
C,
Y [auth c]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
D,
Z [auth d]
Cytochrome b-c1 complex subunit 10, mitochondrial-
AA [auth e],
E
Cytochrome b-c1 complex subunit 9, mitochondrial-
BA [auth f],
F
Cytochrome b-c1 complex subunit 7, mitochondrial-
CA [auth g],
G
Cytochrome b-c1 complex subunit 6, mitochondrial-
DA [auth h],
H
Cytochrome b-c1 complex subunit 8, mitochondrial-
EA [auth j],
I [auth J]
Cytochrome b

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
W [auth a]
IPR007863Peptidase M16, C-terminalDomain
A,
W [auth a]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
W [auth a]
IPR011765Peptidase M16, N-terminalDomain
FA [auth k],
J [auth K]
IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
FA [auth k],
J [auth K]
IPR000883Cytochrome c oxidase subunit IFamily
FA [auth k],
J [auth K]
IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
FA [auth k],
J [auth K]
IPR023616Cytochrome c oxidase-like, subunit I domainDomain
FA [auth k],
J [auth K]
IPR033944Cytochrome c oxidase subunit I domainDomain
GA [auth l],
K [auth L]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
GA [auth l],
K [auth L]
IPR002326Cytochrome c1Family
GA [auth l],
K [auth L]
IPR009056Cytochrome c-like domainDomain
GA [auth l],
K [auth L]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
HA [auth m],
L [auth M]
IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
HA [auth m],
L [auth M]
IPR004202Cytochrome c oxidase subunit VIIcFamily
IA [auth n],
M [auth N]
IPR014367Cytochrome c oxidase subunit VII, budding yeastFamily
IA [auth n],
M [auth N]
IPR039297Cytochrome c oxidase subunit VIIFamily
JA [auth o],
N [auth O]
IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
JA [auth o],
N [auth O]
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
JA [auth o],
N [auth O]
IPR000298Cytochrome c oxidase subunit III-likeDomain
JA [auth o],
N [auth O]
IPR033945Cytochrome c oxidase subunit III domainDomain
JA [auth o],
N [auth O]
IPR024791Cytochrome c oxidase subunit IIIFamily
KA [auth p],
O [auth P]
IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
KA [auth p],
O [auth P]
IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
KA [auth p],
O [auth P]
IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
KA [auth p],
O [auth P]
IPR045187Cytochrome c/quinol oxidase subunit IIFamily
KA [auth p],
O [auth P]
IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
KA [auth p],
O [auth P]
IPR008972CupredoxinHomologous Superfamily
KA [auth p],
O [auth P]
IPR001505Copper centre Cu(A)Binding Site
KA [auth p],
O [auth P]
IPR014222Cytochrome c oxidase, subunit IIDomain
LA [auth q],
P [auth Q]
IPR003204Cytochrome c oxidase, subunit Va/VIFamily
LA [auth q],
P [auth Q]
IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
MA [auth r],
Q [auth R]
IPR014368Cytochrome c oxidase, subunit VIIa, fungalFamily
NA [auth s],
R [auth S]
IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
NA [auth s],
R [auth S]
IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
NA [auth s],
R [auth S]
IPR001349Cytochrome c oxidase, subunit VIaFamily
OA [auth t],
S [auth T]
IPR002124Cytochrome c oxidase, subunit VbFamily
OA [auth t],
S [auth T]
IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
B,
X [auth b]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
X [auth b]
IPR011765Peptidase M16, N-terminalDomain
B,
X [auth b]
IPR001431Peptidase M16, zinc-binding siteBinding Site
PA [auth u],
T [auth U]
IPR036549Cytochrome c oxidase, subunit VIb superfamilyHomologous Superfamily
PA [auth u],
T [auth U]
IPR048280Cytochrome oxidase c subunit VIb-likeFamily
PA [auth u],
T [auth U]
IPR003213Cytochrome c oxidase, subunit VIbFamily
RA [auth w],
V [auth W]
IPR004203Cytochrome c oxidase subunit IV familyFamily
RA [auth w],
V [auth W]
IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
C,
Y [auth c]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
C,
Y [auth c]
IPR014349Rieske iron-sulphur proteinFamily
C,
Y [auth c]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
C,
Y [auth c]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
C,
Y [auth c]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
C,
Y [auth c]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
C,
Y [auth c]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
D,
Z [auth d]
IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
AA [auth e],
E
IPR008027Cytochrome b-c1 complex subunit 9Family
AA [auth e],
E
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
BA [auth f],
F
IPR003197Cytochrome b-c1 complex subunit 7Family
BA [auth f],
F
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
CA [auth g],
G
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
CA [auth g],
G
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
DA [auth h],
H
IPR004205Cytochrome b-c1 complex subunit 8Family
DA [auth h],
H
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
EA [auth j],
I [auth J]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
EA [auth j],
I [auth J]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
EA [auth j],
I [auth J]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
EA [auth j],
I [auth J]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
EA [auth j],
I [auth J]
IPR005798Cytochrome b/b6, C-terminalDomain
EA [auth j],
I [auth J]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
EA [auth j],
I [auth J]
IPR030689Cytochrome bFamily
EA [auth j],
I [auth J]
IPR005797Cytochrome b/b6, N-terminal domainDomain