8EKS | pdb_00008eks

rat TRPV2 in nanodiscs in the presence of weak acid at pH 5


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyAnkyrin repeat 8089701 3000154 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAnkyrin repeat 8089701 3000154 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAnkyrin repeat 8089701 3000154 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAnkyrin repeat 8089701 3000154 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPolyketide_cyc2e8eksD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
CPolyketide_cyc2e8eksC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
BPolyketide_cyc2e8eksB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Polyketide_cyc2ECOD (v294.1)
AMaoC_dehydratase8eksA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: MaoC_dehydratasECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF12796Ankyrin repeats (3 copies) (Ank_2)Ankyrin repeats (3 copies)- Repeat
A, B, C, D
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Transient receptor potential cation channel subfamily V member 2

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage