8F3G

Crystal structure of Penicillin Binding Protein 5 (PBP5) T485M variant in the penicillin bound form from Enterococcus faecium

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03717Penicillin-binding Protein dimerisation domain (PBP_dimer)Penicillin-binding Protein dimerisation domainThis domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerisation. The domain forms a largely disordered 'sugar tongs' st ...This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerisation. The domain forms a largely disordered 'sugar tongs' structure.
Domain
PF00905Penicillin binding protein transpeptidase domain (Transpeptidase)Penicillin binding protein transpeptidase domainThe active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.Domain
PF05223NTF2-like N-terminal transpeptidase domain (MecA_N)NTF2-like N-terminal transpeptidase domainThe structure of this domain from MecA is known [1] Swiss:Q53707 and is found to be similar to that found in NTF2 Pfam:PF02136. This domain seems unlikely to have an enzymatic function, and its role remains unknown.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Penicillin binding protein 5

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR032710NTF2-like domain superfamilyHomologous Superfamily
IPR012338Beta-lactamase/transpeptidase-likeHomologous Superfamily
IPR005311Penicillin-binding protein, dimerisation domainDomain
IPR001460Penicillin-binding protein, transpeptidaseDomain
IPR050515Bacterial Transpeptidases and Beta-LactamasesFamily
IPR007887NTF2-like N-terminal transpeptidaseDomain
IPR036138Penicillin-binding protein, dimerisation domain superfamilyHomologous Superfamily