8FL2

Human nuclear pre-60S ribosomal subunit (State I1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth L9]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8098812 3000210 SCOP2B (2022-06-29)
M [auth LA]SCOP2B SuperfamilyRibosomal protein L22 8076704 3001078 SCOP2B (2022-06-29)
N [auth LB]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095977 3001045 SCOP2B (2022-06-29)
R [auth LF]SCOP2B Superfamily60S Ribosomal protein L22e 8053060 3002158 SCOP2B (2022-06-29)
S [auth LG]SCOP2B Superfamily50S Ribosomal protein L14-like 8072050 3000433 SCOP2B (2022-06-29)
B [auth BB]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8098870 3001911 SCOP2B (2022-06-29)
T [auth LH]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095967 3000210 SCOP2B (2022-06-29)
U [auth LI]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076756 3000334 SCOP2B (2022-06-29)
V [auth LJ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053050 3000334 SCOP2B (2022-06-29)
W [auth LK]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077123 3001045 SCOP2B (2022-06-29)
Y [auth LN]SCOP2B SuperfamilyTranslational proteins 8078351 3000811 SCOP2B (2022-06-29)
Z [auth LO]SCOP2B SuperfamilyL30e-like 8077491 3001739 SCOP2B (2022-06-29)
CA [auth LR]SCOP2B SuperfamilyRibosomal protein L34e-like 8053540 3002203 SCOP2B (2022-06-29)
EA [auth LT]SCOP2B SuperfamilyTranslational proteins 8087455 3000811 SCOP2B (2022-06-29)
FA [auth LU]SCOP2B SuperfamilyRibosomal protein L36e 8053120 3002161 SCOP2B (2022-06-29)
HA [auth LX]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101551 3001320 SCOP2B (2022-06-29)
IA [auth LY]SCOP2B SuperfamilyRibosomal L38e protein-like 8053567 3002206 SCOP2B (2022-06-29)
JA [auth LZ]SCOP2B SuperfamilyRibosomal protein L39e 8095603 3001756 SCOP2B (2022-06-29)
QA [auth NP]SCOP2B Superfamilybeta-beta-alpha zinc fingers 8036154 3001077 SCOP2B (2022-06-29)
YA [auth SA]SCOP2B SuperfamilyRibosomal protein L4 8052832 3001146 SCOP2B (2022-06-29)
YA [auth SA]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052831 3002143 SCOP2B (2022-06-29)
ZA [auth SB]SCOP2B SuperfamilyTranslational machinery components 8052887 3000571 SCOP2B (2022-06-29)
AB [auth SC]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053100 3000334 SCOP2B (2022-06-29)
AB [auth SC]SCOP2B SuperfamilyRibosomal protein L6e, N-terminal domain 8053099 3002160 SCOP2B (2022-06-29)
BB [auth SD]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052923 3001378 SCOP2B (2022-06-29)
BB [auth SD]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052922 3002152 SCOP2B (2022-06-29)
EB [auth SG]SCOP2B SuperfamilyRibosomal protein L6 8033688 3000724 SCOP2B (2022-06-29)
HB [auth SK]SCOP2B SuperfamilyPentein 8098764 3000640 SCOP2B (2022-06-29)
JB [auth SM]SCOP2B SuperfamilyBRCT domain-like 8092279 3000159 SCOP2B (2022-06-29)
H [auth L5]SCOP2B SuperfamilyRL5-like 8073892 3001709 SCOP2B (2022-06-29)
I [auth L6]SCOP2B SuperfamilyRibosomal protein L13e-like 8053155 3002162 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth BA]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
A [auth BA]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
J [auth L7]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth L8]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
L [auth L9]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
M [auth LA]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
N [auth LB]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
O [auth LC]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
P [auth LD]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
S [auth LG]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
B [auth BB]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
T [auth LH]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
T [auth LH]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth LI]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
U [auth LI]PF00467KOW motif (KOW)KOW motif- Family
V [auth LJ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
V [auth LJ]PF00467KOW motif (KOW)KOW motif- Family
W [auth LK]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
X [auth LL]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
AA [auth LP]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
BA [auth LQ]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
DA [auth LS]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
EA [auth LT]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeDomain
FA [auth LU]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
GA [auth LW]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
HA [auth LX]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
IA [auth LY]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
JA [auth LZ]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
KA [auth NB]PF08701GNL3L/Grn1 putative GTPase (GN3L_Grn1)GNL3L/Grn1 putative GTPase- Family
LA [auth NC]PF08153NGP1NT (NUC091) domain (NGP1NT)NGP1NT (NUC091) domainThis N terminal domain is found in a subfamily of hypothetical nucleolar GTP-binding proteins similar to human NGP1 [1]. Domain
LA [auth NC]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
MA [auth NF]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
NA [auth NJ]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
OA [auth NK]PF10169LLP homolog (LLPH)LLP homolog- Family
PA [auth NL]PF07767Nop53 (60S ribosomal biogenesis) (Nop53)Nop53 (60S ribosomal biogenesis)- Family
QA [auth NP]PF12171Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz)Zinc-finger double-stranded RNA-binding- Family
RA [auth NT]PF08158SDA1, HEAT repeat (SDA1_HEAT)SDA1, HEAT repeat- Repeat
RA [auth NT]PF05285SDA1, conserved domain (SDA1_dom)SDA1, conserved domainThis entry includes SDA1 protein and its homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localised in the nucleus [1]. This region i ...Domain
SA [auth NU]PF12333Rix1 complex component involved in 60S ribosome maturation (Ipi1_N)Rix1 complex component involved in 60S ribosome maturation- Repeat
TA [auth NV],
UA [auth NW]
PF14077Alternative WD40 repeat motif (WD40_alt)Alternative WD40 repeat motif- Family
TA [auth NV],
UA [auth NW]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
VA [auth NX],
WA [auth NY]
PF08166PELP1, middle domain (PELP1_HEAT)PELP1, middle domain- Repeat
XA [auth NZ]PF03879Cgr1 family (Cgr1)Cgr1 family- Coiled-coil
YA [auth SA]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
YA [auth SA]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
ZA [auth SB]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
ZA [auth SB]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
AB [auth SC]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
BB [auth SD]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
CB [auth SE]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
DB [auth SF]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
DB [auth SF]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domainDomain
EB [auth SG]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
FB [auth SH]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...Domain
GB [auth SI]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
GB [auth SI]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
HB [auth SK]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
IB [auth SL]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
JB [auth SM]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
JB [auth SM]PF16589BRCT domain (BRCT_2)BRCT domainThis BRCT domain, a BRCA1 C-terminus region, is found on many RAP1 proteins, usually at the very N-terminus. The function in human at least of a BRCT is to contribute to the heterogeneity of the telomere DNA length, but that may not be its general fu ...Domain
KB [auth SQ]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
KB [auth SQ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
LB [auth SR]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1]. Domain
LB [auth SR]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
LB [auth SR]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins. Domain
MB [auth SV]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
H [auth L5]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
H [auth L5]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth BA]60S ribosomal protein L12
J [auth L7]60S ribosomal protein L13a
K [auth L8]60S ribosomal protein L14
L [auth L9]60S ribosomal protein L15
M [auth LA]60S ribosomal protein L17
N [auth LB]60S ribosomal protein L18
O [auth LC]60S ribosomal protein L18a
P [auth LD]60S ribosomal protein L19
Q [auth LE]60S ribosomal protein L21
R [auth LF]60S ribosomal protein L22
S [auth LG]60S ribosomal protein L23
B [auth BB]60S ribosomal protein L10a
T [auth LH]60S ribosomal protein L23a
U [auth LI]60S ribosomal protein L26
V [auth LJ]60S ribosomal protein L27
W [auth LK]60S ribosomal protein L27a
X [auth LL]60S ribosomal protein L28
Y [auth LN]60S ribosomal protein L3
Z [auth LO]60S ribosomal protein L30
AA [auth LP]60S ribosomal protein L31
BA [auth LQ]60S ribosomal protein L32
CA [auth LR]60S ribosomal protein L34
C [auth BD]Ribosomal biogenesis protein LAS1L
DA [auth LS]60S ribosomal protein L35
EA [auth LT]60S ribosomal protein L35a
FA [auth LU]60S ribosomal protein L36
GA [auth LW]60S ribosomal protein L37
HA [auth LX]60S ribosomal protein L37a
IA [auth LY]60S ribosomal protein L38
JA [auth LZ]60S ribosomal protein L39
KA [auth NB]Guanine nucleotide-binding protein-like 3
LA [auth NC]Nucleolar GTP-binding protein 2
MA [auth NF]Ribosome biogenesis protein NSA2 homolog
D [auth L1]5.8S rRNA---
NA [auth NJ]Notchless protein homolog 1-
OA [auth NK]Protein LLP homolog
PA [auth NL]Ribosome biogenesis protein NOP53
QA [auth NP]Zinc finger protein 593
RA [auth NT]Protein SDA1 homolog-
SA [auth NU]Testis-expressed protein 10- -
TA [auth NV],
UA [auth NW]
WD repeat-containing protein 18-
VA [auth NX],
WA [auth NY]
Proline-, glutamic acid- and leucine-rich protein 1
XA [auth NZ]Coiled-coil domain-containing protein 86 -
YA [auth SA]60S ribosomal protein L4
E [auth L2]ITS2 rRNA---
ZA [auth SB]60S ribosomal protein L5
AB [auth SC]60S ribosomal protein L6
BB [auth SD]60S ribosomal protein L7
CB [auth SE]60S ribosomal protein L7a
DB [auth SF]60S ribosomal protein L8
EB [auth SG]60S ribosomal protein L9
FB [auth SH]MKI67 FHA domain-interacting nucleolar phosphoprotein
GB [auth SI]60S ribosomal protein L7-like 1
HB [auth SK]Eukaryotic translation initiation factor 6
IB [auth SL]Ribosomal L1 domain-containing protein 1
F [auth L3]28S rRNA---
JB [auth SM]Pescadillo homolog
KB [auth SQ]mRNA turnover protein 4 homolog
LB [auth SR]GTP-binding protein 4
MB [auth SV]Probable ribosome biogenesis protein RLP24
G [auth L4]5S rRNA---
H [auth L5]60S ribosomal protein L11
I [auth L6]60S ribosomal protein L13

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth BA]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
A [auth BA]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
A [auth BA]IPR000911Ribosomal protein uL11Family
A [auth BA]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
A [auth BA]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
A [auth BA]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
J [auth L7]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth L7]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
J [auth L7]IPR005822Large ribosomal subunit protein uL13Family
J [auth L7]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth L8]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth L8]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth L8]IPR039660Large ribosomal subunit protein eL14Family
K [auth L8]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
K [auth L8]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth L9]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
L [auth L9]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
L [auth L9]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
L [auth L9]IPR000439Large ribosomal subunit protein eL15Family
M [auth LA]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
M [auth LA]IPR001063Large ribosomal subunit protein uL22Family
M [auth LA]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
M [auth LA]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
N [auth LB]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
N [auth LB]IPR000039Large ribosomal subunit protein eL18Family
N [auth LB]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth LB]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
O [auth LC]IPR028877Large ribosomal subunit protein eL20Family
O [auth LC]IPR023573Large ribosomal subunit protein eL20 domainDomain
O [auth LC]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
P [auth LD]IPR039547Large ribosomal subunit protein eL19Family
P [auth LD]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
P [auth LD]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
P [auth LD]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
P [auth LD]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
P [auth LD]IPR000196Large ribosomal subunit protein eL19 domainDomain
Q [auth LE]IPR001147Large ribosomal subunit protein eL21Family
Q [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth LE]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
Q [auth LE]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
R [auth LF]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
R [auth LF]IPR002671Large ribosomal subunit protein eL22Family
S [auth LG]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
S [auth LG]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
S [auth LG]IPR000218Large ribosomal subunit protein uL14Family
B [auth BB]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
B [auth BB]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
B [auth BB]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
B [auth BB]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
B [auth BB]IPR002143Large ribosomal subunit protein uL1Family
B [auth BB]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
T [auth LH]IPR019985Large ribosomal subunit protein uL23Family
T [auth LH]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
T [auth LH]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth LH]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth LH]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth LH]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
U [auth LI]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth LI]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
U [auth LI]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth LI]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth LI]IPR005824KOWDomain
U [auth LI]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth LJ]IPR001141Large ribosomal subunit protein eL27Family
V [auth LJ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
V [auth LJ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth LJ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
V [auth LJ]IPR005824KOWDomain
V [auth LJ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
W [auth LK]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
W [auth LK]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
W [auth LK]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth LK]IPR030878Large ribosomal subunit protein uL15Family
W [auth LK]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
X [auth LL]IPR029004Ribosomal eL28/Mak16Domain
X [auth LL]IPR002672Large ribosomal subunit protein eL28Family
Y [auth LN]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Y [auth LN]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
Y [auth LN]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
Y [auth LN]IPR000597Large ribosomal subunit protein uL3Family
Y [auth LN]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth LO]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
Z [auth LO]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Z [auth LO]IPR000231Large ribosomal subunit protein eL30Family
Z [auth LO]IPR039109Large ribosomal subunit protein eL30-likeFamily
Z [auth LO]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AA [auth LP]IPR000054Large ribosomal subunit protein eL31Family
AA [auth LP]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
AA [auth LP]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
BA [auth LQ]IPR001515Large ribosomal subunit protein eL32Family
BA [auth LQ]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
BA [auth LQ]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
CA [auth LR]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
CA [auth LR]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
CA [auth LR]IPR008195Large ribosomal subunit protein eL34Family
C [auth BD]IPR007174Las1Family
DA [auth LS]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
DA [auth LS]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
DA [auth LS]IPR001854Large ribosomal subunit protein uL29Family
DA [auth LS]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
EA [auth LT]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth LT]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
EA [auth LT]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth LT]IPR001780Large ribosomal subunit protein eL33Family
FA [auth LU]IPR000509Large ribosomal subunit protein eL36Family
FA [auth LU]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
GA [auth LW]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
GA [auth LW]IPR001569Large ribosomal subunit protein eL37Family
GA [auth LW]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
GA [auth LW]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth LX]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
HA [auth LX]IPR002674Large ribosomal subunit protein eL43Family
HA [auth LX]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IA [auth LY]IPR002675Large ribosomal subunit protein eL38Family
IA [auth LY]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
JA [auth LZ]IPR000077Large ribosomal subunit protein eL39Family
JA [auth LZ]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
JA [auth LZ]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth NB]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
KA [auth NB]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
KA [auth NB]IPR006073GTP binding domainDomain
KA [auth NB]IPR014813Guanine nucleotide-binding protein-like 3, N-terminal domainDomain
KA [auth NB]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
LA [auth NC]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
LA [auth NC]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
LA [auth NC]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
LA [auth NC]IPR006073GTP binding domainDomain
LA [auth NC]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
LA [auth NC]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
LA [auth NC]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
MA [auth NF]IPR039411Ribosomal biogenesis NSA2 familyFamily
MA [auth NF]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
NA [auth NJ]IPR019775WD40 repeat, conserved siteConserved Site
NA [auth NJ]IPR012972NLEDomain
NA [auth NJ]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
NA [auth NJ]IPR001632G-protein, beta subunitDomain
NA [auth NJ]IPR001680WD40 repeatRepeat
NA [auth NJ]IPR020472G-protein beta WD-40 repeatRepeat
NA [auth NJ]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
OA [auth NK]IPR018784LLP homolog-likeFamily
PA [auth NL]IPR011687Ribosome biogenesis protein Nop53/GLTSCR2Family
QA [auth NP]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
QA [auth NP]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
QA [auth NP]IPR013087Zinc finger C2H2-typeDomain
QA [auth NP]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
QA [auth NP]IPR022755Zinc finger, double-stranded RNA bindingDomain
RA [auth NT]IPR048292SDA1, C-terminal domainDomain
RA [auth NT]IPR016024Armadillo-type foldHomologous Superfamily
RA [auth NT]IPR007949SDA1, middle domainDomain
RA [auth NT]IPR027312Sda1Family
RA [auth NT]IPR012977SDA1, N-terminalDomain
SA [auth NU]IPR024679Pre-rRNA-processing protein Ipi1, N-terminalDomain
SA [auth NU]IPR011989Armadillo-like helicalHomologous Superfamily
SA [auth NU]IPR016024Armadillo-type foldHomologous Superfamily
SA [auth NU]IPR021133HEAT, type 2Repeat
TA [auth NV],
UA [auth NW]
IPR019775WD40 repeat, conserved siteConserved Site
TA [auth NV],
UA [auth NW]
IPR045227WD repeat-containing protein WDR18/Ipi3/RID3Family
TA [auth NV],
UA [auth NW]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
TA [auth NV],
UA [auth NW]
IPR026987WD repeat-containing protein 18, C-terminal domainDomain
TA [auth NV],
UA [auth NW]
IPR001680WD40 repeatRepeat
TA [auth NV],
UA [auth NW]
IPR020472G-protein beta WD-40 repeatRepeat
TA [auth NV],
UA [auth NW]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
VA [auth NX],
WA [auth NY]
IPR016024Armadillo-type foldHomologous Superfamily
VA [auth NX],
WA [auth NY]
IPR012583Pre-rRNA-processing protein RIX1, N-terminalDomain
VA [auth NX],
WA [auth NY]
IPR012980PELP1, middle domainDomain
VA [auth NX],
WA [auth NY]
IPR011989Armadillo-like helicalHomologous Superfamily
XA [auth NZ]IPR026570Coiled-coil domain-containing protein 86Family
XA [auth NZ]IPR005579Cgr1-likeFamily
YA [auth SA]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
YA [auth SA]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
YA [auth SA]IPR002136Large ribosomal subunit protein uL4Family
YA [auth SA]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
YA [auth SA]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
ZA [auth SB]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
ZA [auth SB]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
AB [auth SC]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
AB [auth SC]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
AB [auth SC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AB [auth SC]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
AB [auth SC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AB [auth SC]IPR000915Large ribosomal subunit protein eL6Family
BB [auth SD]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
BB [auth SD]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BB [auth SD]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
BB [auth SD]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BB [auth SD]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
BB [auth SD]IPR039699Large ribosomal subunit protein uL30Family
BB [auth SD]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
CB [auth SE]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
CB [auth SE]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
CB [auth SE]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
CB [auth SE]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CB [auth SE]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
CB [auth SE]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
DB [auth SF]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
DB [auth SF]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DB [auth SF]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DB [auth SF]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
DB [auth SF]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
DB [auth SF]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DB [auth SF]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
DB [auth SF]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
DB [auth SF]IPR002171Large ribosomal subunit protein uL2Family
EB [auth SG]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
EB [auth SG]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
EB [auth SG]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
EB [auth SG]IPR000702Large ribosomal subunit protein uL6-likeFamily
FB [auth SH]IPR021043MKI67 FHA domain-interacting nucleolar phosphoprotein, FHA Ki67 bindingDomain
FB [auth SH]IPR000504RNA recognition motif domainDomain
FB [auth SH]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FB [auth SH]IPR035979RNA-binding domain superfamilyHomologous Superfamily
GB [auth SI]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
GB [auth SI]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
GB [auth SI]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
GB [auth SI]IPR039699Large ribosomal subunit protein uL30Family
GB [auth SI]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
GB [auth SI]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
GB [auth SI]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
HB [auth SK]IPR002769Translation initiation factor IF6Family
IB [auth SL]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
IB [auth SL]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
IB [auth SL]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
JB [auth SM]IPR010613PescadilloFamily
JB [auth SM]IPR001357BRCT domainDomain
JB [auth SM]IPR036420BRCT domain superfamilyHomologous Superfamily
KB [auth SQ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
KB [auth SQ]IPR001790Large ribosomal subunit protein uL10Family
KB [auth SQ]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
KB [auth SQ]IPR051742Ribosomal Assembly Factor uL10Family
KB [auth SQ]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
KB [auth SQ]IPR033867Ribosome assembly factor Mrt4Family
LB [auth SR]IPR024926Nucleolar GTP-binding protein 1Family
LB [auth SR]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
LB [auth SR]IPR005225Small GTP-binding domainDomain
LB [auth SR]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
LB [auth SR]IPR012973NOG, C-terminalDomain
LB [auth SR]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
LB [auth SR]IPR041623NOG1, N-terminal helical domainDomain
LB [auth SR]IPR006073GTP binding domainDomain
MB [auth SV]IPR011017TRASH domainDomain
MB [auth SV]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
MB [auth SV]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
MB [auth SV]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
H [auth L5]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
H [auth L5]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
H [auth L5]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
H [auth L5]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
H [auth L5]IPR002132Large ribosomal subunit protein uL5Family
I [auth L6]IPR001380Large ribosomal subunit protein eL13Family
I [auth L6]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth BA]PharosP30050
J [auth L7]PharosP40429
K [auth L8]PharosP50914
L [auth L9]PharosP61313
M [auth LA]PharosP18621
N [auth LB]PharosQ07020
P [auth LD]PharosP84098
Q [auth LE]PharosP46778
R [auth LF]PharosP35268
S [auth LG]PharosP62829
B [auth BB]PharosP62906
T [auth LH]PharosP62750
U [auth LI]PharosP61254
V [auth LJ]PharosP61353
W [auth LK]PharosP46776
X [auth LL]PharosP46779
Y [auth LN]PharosP39023
Z [auth LO]PharosP62888
AA [auth LP]PharosP62899
BA [auth LQ]PharosP62910
CA [auth LR]PharosP49207
C [auth BD]PharosQ9Y4W2
DA [auth LS]PharosP42766
EA [auth LT]PharosP18077
FA [auth LU]PharosQ9Y3U8
GA [auth LW]PharosP61927
HA [auth LX]PharosP61513
IA [auth LY]PharosP63173
KA [auth NB]PharosQ9BVP2
LA [auth NC]PharosQ13823
MA [auth NF]PharosO95478
NA [auth NJ]PharosQ9NVX2
OA [auth NK]PharosQ9BRT6
PA [auth NL]PharosQ9NZM5
QA [auth NP]PharosO00488
RA [auth NT]PharosQ9NVU7
SA [auth NU]PharosQ9NXF1
TA [auth NV],
UA [auth NW]
PharosQ9BV38
VA [auth NX],
WA [auth NY]
PharosQ8IZL8
XA [auth NZ]PharosQ9H6F5
YA [auth SA]PharosP36578
ZA [auth SB]PharosP46777
AB [auth SC]PharosQ02878
BB [auth SD]PharosP18124
CB [auth SE]PharosP62424
EB [auth SG]PharosP32969
FB [auth SH]PharosQ9BYG3
GB [auth SI]PharosQ6DKI1
HB [auth SK]PharosP56537
IB [auth SL]PharosO76021
JB [auth SM]PharosO00541
KB [auth SQ]PharosQ9UKD2
LB [auth SR]PharosQ9BZE4
MB [auth SV]PharosQ9UHA3
H [auth L5]PharosP62913
I [auth L6]PharosP26373

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
Y [auth LN]HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322
D [auth L1]OMG Parent Component: G

RESIDAA0317

D [auth L1]PSU Parent Component: U

RESIDAA0317

F [auth L3]1MA Parent Component: A

RESIDAA0317

F [auth L3]5MC Parent Component: C

RESIDAA0317

F [auth L3]6MZ Parent Component: A

RESIDAA0317

F [auth L3]A2M Parent Component: A

RESIDAA0317

F [auth L3]OMC Parent Component: C

RESIDAA0317

F [auth L3]OMG Parent Component: G

RESIDAA0317

F [auth L3]OMU Parent Component: U

RESIDAA0317

F [auth L3]PSU Parent Component: U

RESIDAA0317

F [auth L3]UR3 Parent Component: U

RESIDAA0317