8GYE
Crystal Structure of the 4-1BB in complex with ZG033 Fab
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e8gyeA1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF07699 | e8gyeA3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: PF07699 | ECOD (1.6) |
B [auth D] | F_UNCLASSIFIED | e8gyeD3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth D] | PF07699 | e8gyeD2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: PF07699 | ECOD (1.6) |
C [auth B] | PF07654 | e8gyeB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
C [auth B] | PF07686 | e8gyeB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E | PF07654 | e8gyeE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
E | PF07686 | e8gyeE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth C] | PF07654 | e8gyeC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
D [auth C] | PF07686 | e8gyeC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
F | PF07654 | e8gyeF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
F | PF07686 | e8gyeF2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth B], E | Heavy Chain | IGHV2 | - | tumor necrosis factor receptor superfamily member 9 | SAbDab (2024-06-21) |
D [auth C], F | Light Chain | IGKV10 | Kappa | tumor necrosis factor receptor superfamily member 9 | SAbDab (2024-06-21) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth D] | PF00020 | TNFR/NGFR cysteine-rich region (TNFR_c6) | TNFR/NGFR cysteine-rich region | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth D] | IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily |
A, B [auth D] | IPR001368 | TNFR/NGFR cysteine-rich region | Domain |
A, B [auth D] | IPR020413 | Tumour necrosis factor receptor 9 | Family |
A, B [auth D] | IPR034020 | Tumour necrosis factor receptor 9, N-terminal | Domain |