X-ray Structure of photosystem I-LHCI super complex from Chlamydomonas reinhardtii.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IMRS2-likee8h2uI1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
HMRS2-likee8h2uH1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
GMRS2-likee8h2uG1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
FMRS2-likee8h2uF1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
EMRS2-likee8h2uE1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
DMRS2-likee8h2uD1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
CMRS2-likee8h2uC1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
BMRS2-likee8h2uB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
T [auth 5]MRS2-likee8h2u51 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
S [auth 6]MRS2-likee8h2u61 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
R [auth 4]MRS2-likee8h2u41 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
P [auth 3]MRS2-likee8h2u31 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
O [auth 7]MRS2-likee8h2u71 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
N [auth 8]MRS2-likee8h2u81 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
M [auth 0]MRS2-likee8h2u01 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
Q [auth 1]Glyco_hydro_43e8h2u11 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
LMRS2-likee8h2uL1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
KMRS2-likee8h2uK1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
JMRS2-likee8h2uJ1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)
AMRS2-likee8h2uA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Photosystem I reaction center subunit VIII-
Photosystem I reaction center subunit VI, chloroplastic-
Photosystem I reaction center subunit V, chloroplastic-
Photosystem I reaction center subunit III, chloroplastic-
Photosystem I reaction center subunit IV, chloroplastic-
Photosystem I reaction center subunit II, chloroplastic-
Photosystem I iron-sulfur center
Photosystem I P700 chlorophyll a apoprotein A2
T [auth 5]Chlorophyll a-b binding protein, chloroplastic-
S [auth 6]Chlorophyll a-b binding protein, chloroplastic-
R [auth 4]Chlorophyll a-b binding protein, chloroplastic-
P [auth 3]Lhca3---
O [auth 7]Chlorophyll a-b binding protein, chloroplastic-
N [auth 8]Chlorophyll a-b binding protein, chloroplastic-
M [auth 0],
Q [auth 1]
Chlorophyll a-b binding protein, chloroplastic-
PSI subunit V-
Photosystem I reaction center subunit psaK, chloroplastic-
Photosystem I reaction center subunit IX-
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
IPR001302Photosystem I reaction centre subunit VIIIFamily
IPR004928Photosystem I PsaH, reaction centre subunit VIFamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR017494Photosystem I reaction center subunit VFamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
T [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
T [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
S [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
S [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
R [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
R [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
N [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
M [auth 0],
Q [auth 1]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 0],
Q [auth 1]
IPR022796Chlorophyll A-B binding proteinFamily
IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
IPR022980Photosystem I, reaction centre subunit XIFamily
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR017493Photosystem I reaction center subunit psaK, plantFamily
IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD