8JL0 | pdb_00008jl0

Cryo-EM structure of the prokaryotic SPARSA system complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDNA_topoisoIVe8jl0B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13289SIR2-like domain (SIR2_2)SIR2-like domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth C]RNA (5'-R(P*AP*UP*AP*AP*UP*GP*GP*UP*UP*UP*CP*UP*UP*AP*GP*AP*CP*GP*UP*CP*GP*U)-3')---
C [auth D]DNA (5'-D(P*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*T)-3')---
Piwi domain protein - -
Sir2 superfamily protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036397Ribonuclease H superfamilyHomologous Superfamily
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
IPR029035DHS-like NAD/FAD-binding domain superfamilyHomologous Superfamily