Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00850e8kc7A1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: Arginase/deacetylaseF: PF00850ECOD (1.6)
E [auth F]PF05712e8kc7F1 A: alpha arraysX: MRG domain (From Topology)H: MRG domain (From Topology)T: MRG domainF: PF05712ECOD (1.6)
C [auth D]PF05712e8kc7D1 A: alpha arraysX: MRG domain (From Topology)H: MRG domain (From Topology)T: MRG domainF: PF05712ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00850Histone deacetylase domain (Hist_deacetyl)Histone deacetylase domainHistones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1]. ...Histones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1].
Domain
PF02671Paired amphipathic helix repeat (PAH)Paired amphipathic helix repeat- Repeat
PF16879C-terminal domain of Sin3a protein (Sin3a_C)C-terminal domain of Sin3a protein- Family
D [auth E],
F [auth G]
PF00628PHD-finger (PHD)PHD-fingerPHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains [2]. Several PHD fingers have been identified as binding modules of methylated histone H3 [3].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Histone deacetylase RPD3
Transcriptional regulatory protein SIN3
C [auth D],
E [auth F]
Chromatin modification-related protein EAF3-
D [auth E],
F [auth G]
Transcriptional regulatory protein RCO1