8PV6

Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth CK]SCOP2B Superfamily50S Ribosomal protein L14-like 8053081 3000433 SCOP2B (2022-06-29)
L [auth CN]SCOP2B SuperfamilyPentein 8084662 3000640 SCOP2B (2022-06-29)
AA [auth LB]SCOP2B SuperfamilyTranslational proteins 8106162 3000811 SCOP2B (2022-06-29)
HA [auth LJ]SCOP2B SuperfamilyRL5-like 8077505 3001709 SCOP2B (2022-06-29)
LA [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8106168 3000210 SCOP2B (2022-06-29)
VA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8106166 3000334 SCOP2B (2022-06-29)
ZA [auth Lc]SCOP2B SuperfamilyL30e-like 8106196 3001739 SCOP2B (2022-06-29)
CB [auth Lf]SCOP2B SuperfamilyTranslational proteins 8106190 3000811 SCOP2B (2022-06-29)
DB [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like 8106200 3002203 SCOP2B (2022-06-29)
IB [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e 8106282 3001756 SCOP2B (2022-06-29)
JB [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8106178 3001320 SCOP2B (2022-06-29)
BA [auth LC]SCOP2B SuperfamilyRibosomal protein L4 8077111 3001146 SCOP2B (2022-06-29)
CA [auth LD]SCOP2B SuperfamilyTranslational machinery components 8106194 3000571 SCOP2B (2022-06-29)
PA [auth LR]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8106186 3000890 SCOP2B (2022-06-29)
SA [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e 8106192 3002158 SCOP2B (2022-06-29)
TA [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like 8106208 3000433 SCOP2B (2022-06-29)
BB [auth Le]SCOP2B SuperfamilyRibosomal protein L32e 8106182 3000982 SCOP2B (2022-06-29)
HB [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like 8106202 3002206 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth CH]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1].Domain
F [auth CH]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
F [auth CH]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins.Domain
F [auth CH]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
G [auth CI]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
H [auth CJ]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
H [auth CJ]PF00533BRCA1 C Terminus (BRCT) domain (BRCT)BRCA1 C Terminus (BRCT) domain- Family
I [auth CK]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
J [auth CL]PF08701GNL3L/Grn1 putative GTPase (GN3L_Grn1)GNL3L/Grn1 putative GTPase- Family
L [auth CN]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
P [auth CS]PF12333Rix1 complex component involved in 60S ribosome maturation (Ipi1_N)Rix1 complex component involved in 60S ribosome maturation- Family
Z [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
Z [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth LE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
DA [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
FA [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
HA [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
HA [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
HA [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
JA [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
KA [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
LA [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
MA [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
NA [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
NA [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
OA [auth LQ]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
OA [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QA [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
UA [auth LX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
UA [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
VA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
VA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
EA [auth LF],
K [auth CM]
PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
EA [auth LF],
K [auth CM]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
EA [auth LF],
K [auth CM]
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
N [auth CQ]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
O [auth CR]PF08158SDA1, HEAT repeat (SDA1_HEAT)SDA1, HEAT repeat- Repeat
Q [auth CT],
R [auth CU]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
S [auth CV],
T [auth CW]
PF08167rRNA processing/ribosome biogenesis (RIX1)rRNA processing/ribosome biogenesis- Repeat
BA [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
BA [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
CA [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
CA [auth LD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
CA [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
GA [auth LH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
IA [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
IA [auth LK]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
IA [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
PA [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
PA [auth LR]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
SA [auth LU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
TA [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
WA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
E [auth CF]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
E [auth CF]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C1]26S rRNA---
C [auth C3]ITS2---
D [auth C4]5S rRNA---
F [auth CH]Nucleolar GTP-binding protein 1
G [auth CI]Putative RNA-binding protein
H [auth CJ]Pescadillo homolog
I [auth CK]Ribosome biogenesis protein NSA2 homolog-
J [auth CL]Putative GTP binding protein -
L [auth CN]Eukaryotic translation initiation factor 6
M [auth CO]DUF2423 domain-containing protein- -
P [auth CS]Pre-rRNA-processing protein IPI1-
V [auth Cd]Nucleolar GTP-binding protein 2 -
W [auth Ce]Ribosome biogenesis protein NOP53
Y [auth Cz]rRNA-processing protein-
Z [auth LA]60S ribosomal protein L2-like protein
AA [auth LB]60S ribosomal protein L3-like protein
DA [auth LE]60S ribosomal protein L6
FA [auth LG]60S ribosomal protein L8
HA [auth LJ]Putative ribosomal protein
JA [auth LL]60S ribosomal protein L13
KA [auth LM]60S ribosomal protein L14-like protein
LA [auth LN]Ribosomal protein L15
MA [auth LO]60S ribosomal protein L16-like protein
NA [auth LP]60S ribosomal protein l17-like protein
OA [auth LQ]Ribosomal protein L18-like protein
QA [auth LS]60S ribosomal protein L20
RA [auth LT]60S ribosomal protein l21-like protein
UA [auth LX]60S ribosomal protein L25-like protein
VA [auth LY]60S ribosomal protein L26-like protein
XA [auth La]60S ribosomal protein L28-like protein---
YA [auth Lb]60S ribosomal protein L29
ZA [auth Lc]60S ribosomal protein l30-like protein -
CB [auth Lf]60S ribosomal protein l33-like protein
DB [auth Lg]Ribosomal protein l34-like protein
EB [auth Lh]dolichyl-diphosphooligosaccharide--protein glycotransferase
GB [auth Lj]Ribosomal protein L37
IB [auth Ll]Ribosomal protein eL39
JB [auth Lp]60S ribosomal protein L43-like protein
KB [auth Lq]Putative 60S ribosomal protein
LB [auth Lr]Ribosomal protein
EA [auth LF],
K [auth CM]
60S ribosomal protein l7-like protein
N [auth CQ]Ribosome biogenesis protein RLP24-
O [auth CR]Protein SDA1-
Q [auth CT],
R [auth CU]
Pre-rRNA-processing protein IPI3-
S [auth CV],
T [auth CW]
Pre-rRNA-processing protein RIX1-
U [auth Cb]Zinc finger domain-containing protein
B [auth C2]5.8S rRNA---
X [auth Ch]Ribosome assembly protein 4-
BA [auth LC]60S ribosomal protein L4-like protein
CA [auth LD]60S ribosomal protein l5-like protein
GA [auth LH]60S ribosomal protein l9-like protein---
IA [auth LK]60S ribosomal protein L12-like protein
PA [auth LR]Ribosomal protein L19
SA [auth LU]60S ribosomal protein L22-like protein
TA [auth LV]60S ribosomal protein l23-like protein
WA [auth LZ]60S ribosomal protein L27
E [auth CF]Large ribosomal subunit protein uL10
AB [auth Ld]Putative 60S ribosomal protein
BB [auth Le]60S ribosomal protein L32-like protein
FB [auth Li]60S ribosomal protein L36
HB [auth Lk]60S ribosomal protein L38-like protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth CH]IPR024926Nucleolar GTP-binding protein 1Family
F [auth CH]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
F [auth CH]IPR012973NOG, C-terminalDomain
F [auth CH]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
F [auth CH]IPR041623NOG1, N-terminal helical domainDomain
F [auth CH]IPR006073GTP binding domainDomain
F [auth CH]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
G [auth CI]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
G [auth CI]IPR000504RNA recognition motif domainDomain
G [auth CI]IPR035979RNA-binding domain superfamilyHomologous Superfamily
H [auth CJ]IPR001357BRCT domainDomain
H [auth CJ]IPR010613PescadilloFamily
H [auth CJ]IPR036420BRCT domain superfamilyHomologous Superfamily
I [auth CK]IPR039411Ribosomal biogenesis NSA2 familyFamily
I [auth CK]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
J [auth CL]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
J [auth CL]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
J [auth CL]IPR006073GTP binding domainDomain
J [auth CL]IPR014813Guanine nucleotide-binding protein-like 3, N-terminal domainDomain
J [auth CL]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
J [auth CL]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
L [auth CN]IPR002769Translation initiation factor IF6Family
M [auth CO]IPR019434Domain of unknown function DUF2423Domain
P [auth CS]IPR024679Pre-rRNA-processing protein Ipi1, N-terminalDomain
P [auth CS]IPR016024Armadillo-type foldHomologous Superfamily
V [auth Cd]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
V [auth Cd]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
V [auth Cd]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
V [auth Cd]IPR006073GTP binding domainDomain
V [auth Cd]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
V [auth Cd]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
V [auth Cd]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
W [auth Ce]IPR011687Ribosome biogenesis protein Nop53/GLTSCR2Family
Y [auth Cz]IPR005579Cgr1-likeFamily
Z [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Z [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Z [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Z [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Z [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Z [auth LA]IPR002171Large ribosomal subunit protein uL2Family
AA [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
AA [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AA [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
AA [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
AA [auth LB]IPR000597Large ribosomal subunit protein uL3Family
DA [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
DA [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
DA [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth LE]IPR000915Large ribosomal subunit protein eL6Family
FA [auth LG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
FA [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FA [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
FA [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth LG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
FA [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
HA [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
HA [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
HA [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
HA [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
HA [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
JA [auth LL]IPR001380Large ribosomal subunit protein eL13Family
JA [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
KA [auth LM]IPR039660Large ribosomal subunit protein eL14Family
KA [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
KA [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
KA [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
KA [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LA [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
LA [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
LA [auth LN]IPR000439Large ribosomal subunit protein eL15Family
MA [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
MA [auth LO]IPR005822Large ribosomal subunit protein uL13Family
MA [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
MA [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
NA [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
NA [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
NA [auth LP]IPR001063Large ribosomal subunit protein uL22Family
NA [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
OA [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
OA [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
OA [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
OA [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth LS]IPR028877Large ribosomal subunit protein eL20Family
QA [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
QA [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
RA [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
RA [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
RA [auth LT]IPR001147Large ribosomal subunit protein eL21Family
RA [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
UA [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
UA [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
UA [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
VA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
VA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
VA [auth LY]IPR005824KOWDomain
VA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
VA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
YA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
ZA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
ZA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
ZA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
ZA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
ZA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CB [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
CB [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CB [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
CB [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DB [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
DB [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
EB [auth Lh]IPR003674Oligosaccharyl transferase, STT3 subunitFamily
EB [auth Lh]IPR048307Oligosaccharyl transferase STT3, N-terminal domainDomain
EB [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
EB [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
EB [auth Lh]IPR048999STT3/PglB/AglB, core domainDomain
GB [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
GB [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
GB [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GB [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IB [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
IB [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
JB [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
JB [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JB [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
JB [auth Lp]IPR050522Eukaryotic ribosomal protein eL43Family
KB [auth Lq]IPR029004Ribosomal eL28/Mak16Domain
KB [auth Lq]IPR002672Large ribosomal subunit protein eL28Family
LB [auth Lr]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
LB [auth Lr]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
LB [auth Lr]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
LB [auth Lr]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
LB [auth Lr]IPR002143Large ribosomal subunit protein uL1Family
LB [auth Lr]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
EA [auth LF],
K [auth CM]
IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
EA [auth LF],
K [auth CM]
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
EA [auth LF],
K [auth CM]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
EA [auth LF],
K [auth CM]
IPR039699Large ribosomal subunit protein uL30Family
EA [auth LF],
K [auth CM]
IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
EA [auth LF],
K [auth CM]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
N [auth CQ]IPR011017TRASH domainDomain
N [auth CQ]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
N [auth CQ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
O [auth CR]IPR048292SDA1, C-terminal domainDomain
O [auth CR]IPR016024Armadillo-type foldHomologous Superfamily
O [auth CR]IPR007949SDA1, middle domainDomain
O [auth CR]IPR027312Sda1Family
O [auth CR]IPR012977SDA1, N-terminalDomain
Q [auth CT],
R [auth CU]
IPR001680WD40 repeatRepeat
Q [auth CT],
R [auth CU]
IPR045227WD repeat-containing protein WDR18/Ipi3/RID3Family
Q [auth CT],
R [auth CU]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
Q [auth CT],
R [auth CU]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
S [auth CV],
T [auth CW]
IPR016024Armadillo-type foldHomologous Superfamily
S [auth CV],
T [auth CW]
IPR012583Pre-rRNA-processing protein RIX1, N-terminalDomain
U [auth Cb]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
U [auth Cb]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
U [auth Cb]IPR013087Zinc finger C2H2-typeDomain
U [auth Cb]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
U [auth Cb]IPR022755Zinc finger, double-stranded RNA bindingDomain
X [auth Ch]IPR001680WD40 repeatRepeat
X [auth Ch]IPR019775WD40 repeat, conserved siteConserved Site
X [auth Ch]IPR020472G-protein beta WD-40 repeatRepeat
X [auth Ch]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
X [auth Ch]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
BA [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
BA [auth LC]IPR002136Large ribosomal subunit protein uL4Family
BA [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
BA [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
BA [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
CA [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
CA [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
IA [auth LK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
IA [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
IA [auth LK]IPR000911Ribosomal protein uL11Family
IA [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
IA [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
IA [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
PA [auth LR]IPR016024Armadillo-type foldHomologous Superfamily
PA [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
PA [auth LR]IPR004155PBS lyase HEAT-like repeatRepeat
PA [auth LR]IPR034085TOG domainDomain
PA [auth LR]IPR019399Parkin co-regulated proteinFamily
PA [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
PA [auth LR]IPR021133HEAT, type 2Repeat
PA [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
PA [auth LR]IPR011989Armadillo-like helicalHomologous Superfamily
PA [auth LR]IPR022716Gcn1, N-terminalDomain
PA [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
PA [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
SA [auth LU]IPR002671Large ribosomal subunit protein eL22Family
SA [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
TA [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
TA [auth LV]IPR000218Large ribosomal subunit protein uL14Family
TA [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
WA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
WA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
WA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
WA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
E [auth CF]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
E [auth CF]IPR001790Large ribosomal subunit protein uL10Family
E [auth CF]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
E [auth CF]IPR051742Ribosomal Assembly Factor uL10Family
E [auth CF]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
E [auth CF]IPR033867Ribosome assembly factor Mrt4Family
AB [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
AB [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
AB [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
BB [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
BB [auth Le]IPR001515Large ribosomal subunit protein eL32Family
FB [auth Li]IPR000509Large ribosomal subunit protein eL36Family
FB [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
HB [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
HB [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily