Annotations: 8RFJ

DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	WD40	e8rfjA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B	WD40	e8rfjB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C	WD40	e8rfjC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D	WD40	e8rfjD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E	WD40	e8rfjE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
L [auth M]	WD40	e8rfjM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	CRISPR type AFERR-associated protein Csf2	-	-	-
F	CRISPR type AFERR-associated protein Csf3	-	-	-
G	CRISPR type AFERR-associated protein Csf1	cation binding ion binding binding metal ion binding small molecule binding	-	-
H	crRNA	-	-	-
I	Target strand (TS-)DNA	-	-	-
J	Non-target strand (NTS-) DNA	-	-	-
K	ATP-dependent DNA helicase DinG	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides nucleic acid binding	nucleobase-containing compound metabolic process primary metabolic process metabolic process cellular process	-
L [auth M]	CRISPR type AFERR-associated protein Csf5	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR017546	CRISPR type IV/AFERR-associated protein Csf2	Family
F	IPR060649	CRISPR type IV associated protein Csf3	Family
G	IPR017545	CRISPR-associated protein Csf1	Family
K	IPR006555	ATP-dependent helicase, C-terminal	Domain
K	IPR014013	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Domain
K	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
L [auth M]	IPR054670	Type IV CRISPR-associated endonuclease Csf5	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8RFJ | pdb_00008rfj

DNA bound type IV-A1 CRISPR effector complex with the DinG helicase from P. oleovorans

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage