8RJA

Crystal structure of the F420-reducing formylmethanofuran dehydrogenase complex from the ethanotroph Candidatus Ethanoperedens thermophilum

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, G	Formylmethanofuran dehydrogenase subunit A	allantoinase activity hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-
E, K	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus	iron-sulfur cluster binding binding metal cluster binding small molecule binding oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor oxidoreductase activity oxidoreductase activity, acting on CH or CH2 groups 7-hydroxymethyl chlorophyll a reductase activity catalytic activity	tetrapyrrole metabolic process chlorophyll metabolic process chlorophyll cycle metabolic process porphyrin-containing compound metabolic process	-
B, H	Formylmethanofuran dehydrogenase subunit B	formylmethanofuran dehydrogenase activity oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity	cellular respiration energy derivation by oxidation of organic compounds cellular biosynthetic process cellular metabolic process alkane biosynthetic process methane metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds cellular alkane metabolic process methanogenesis metabolic process cellular process cellular respiration energy derivation by oxidation of organic compounds cellular biosynthetic process cellular metabolic process alkane biosynthetic process methane metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds cellular alkane metabolic process methanogenesis metabolic process cellular process hydrocarbon biosynthetic process anaerobic respiration	-
C, I	formylmethanofuran dehydrogenase	cation binding transition metal ion binding ion binding binding metal ion binding small molecule binding formylmethanofuran dehydrogenase activity oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity	cellular respiration energy derivation by oxidation of organic compounds cellular biosynthetic process cellular metabolic process alkane biosynthetic process methane metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds cellular alkane metabolic process methanogenesis metabolic process cellular process cellular respiration energy derivation by oxidation of organic compounds cellular biosynthetic process cellular metabolic process alkane biosynthetic process methane metabolic process generation of precursor metabolites and energy hydrocarbon metabolic process biosynthetic process energy derivation by oxidation of reduced inorganic compounds cellular alkane metabolic process methanogenesis metabolic process cellular process hydrocarbon biosynthetic process methanogenesis, from carbon dioxide anaerobic respiration	-
D, J	Formylmethanofuran dehydrogenase subunit D	binding organic cyclic compound binding molybdopterin cofactor binding formylmethanofuran dehydrogenase activity oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity	-	-
F, L	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic	oxidoreductase activity NADH:ubiquinone reductase (non-electrogenic) activity oxidoreductase activity, acting on NAD(P)H catalytic activity oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor NADH dehydrogenase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, G	IPR012027	Formylmethanofuran dehydrogenase, subunit A	Family
A, G	IPR013108	Amidohydrolase 3	Domain
A, G	IPR050378	Metallo-dependent Hydrolases Superfamily	Family
A, G	IPR011059	Metal-dependent hydrolase, composite domain superfamily	Homologous Superfamily
A, G	IPR032466	Metal-dependent hydrolase	Homologous Superfamily
E, K	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
E, K	IPR045220	Oxidoreductase FRHB/FDHB/HCAR-like	Family
E, K	IPR007516	Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal	Domain
E, K	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
E, K	IPR007525	Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal	Domain
B, H	IPR006656	Molybdopterin oxidoreductase	Domain
B, H	IPR050123	Prokaryotic molybdopterin-containing oxidoreductase	Family
B, H	IPR016457	Formylmethanofuran dehydrogenase, subunit B	Family
C, I	IPR036485	Glutamate synthase, alpha subunit, C-terminal domain superfamily	Homologous Superfamily
C, I	IPR017550	Formylmethanofuran dehydrogenase subunit C	Domain
D, J	IPR006657	Molybdopterin dinucleotide-binding domain	Domain
D, J	IPR009010	Aspartate decarboxylase-like domain superfamily	Homologous Superfamily
D, J	IPR012040	Formylmethanofuran dehydrogenase, subunit D	Family
F, L	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
F, L	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

8RJA

Crystal structure of the F420-reducing formylmethanofuran dehydrogenase complex from the ethanotroph Candidatus Ethanoperedens thermophilum

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage