Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K Cas12k domain local-refinement map
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth B] | WD40 | e8rktB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| E [auth B] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| F [auth C] | TniQ | - | - | - |
| E [auth B] | Small ribosomal subunit protein uS15 |
| ||
| D [auth A] | ShCas12k | - | - | - |
| C [auth 3] | Target strand - LE | - | - | - |
| B [auth 2] | Non-target strand - LE | - | - | - |
| A [auth 1] | sgRNA | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| F [auth C] | IPR009492 | TniQ | Domain |
| E [auth B] | IPR005290 | Small ribosomal subunit protein uS15, bacteria | Family |
| E [auth B] | IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily |
| E [auth B] | IPR000589 | Small ribosomal subunit protein uS15 | Family |
| D [auth A] | IPR049868 | Type V CRISPR-associated protein Cas12k | Family |














