Annotations: 8S79

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e8s79A01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
B	WD40	e8s79B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C		e8s79C01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
D	WD40	e8s79D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
C, D	Heavy Chain	IGHV1	-	nod-factor receptor 5	SAbDab (2026-06-12)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nod-factor receptor 5	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	-	cell periphery cellular anatomical structure plasma membrane membrane
C, D	Nanobody 200	-	-	-

Chains	Accession	Name	Type
A, B	IPR059144	NFP, third LysM domain	Domain
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR008266	Tyrosine-protein kinase, active site	Active Site
A, B	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A, B	IPR018392	LysM domain	Domain
A, B	IPR056561	NFP/LYK4/5, first LysM domain	Domain
A, B	IPR052611	Plant receptor-like kinase with LysM domain-containing protein	Family
A, B	IPR059143	NFP, second LysM domain	Domain
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8S79 | pdb_00008s79