Annotations: 8SUF

The complex of TOL-1 ectodomain bound to LAT-1 Lectin domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	WD40	e8sufD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C	WD40	e8sufC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B	WD40	e8sufB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
A	Dynamin_N	e8sufA01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Dynamin_N	ECOD (v294.2)
H	WD40	e8sufH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
G	WD40	e8sufG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
F	WD40	e8sufF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E	Dynamin_N	e8sufE01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Dynamin_N	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat
A, B, C, D	PF00560	Leucine Rich Repeat (LRR_1)	Leucine Rich Repeat	-	Repeat
E, F, G, H	PF02140	D-galactoside/L-rhamnose binding SUEL lectin domain (SUEL_Lectin)	D-galactoside/L-rhamnose binding SUEL lectin domain	The D-galactoside binding lectin purified from sea urchin (Anthocidaris crassispina) eggs exists as a disulphide-linked homodimer of two subunits; the dimeric form is essential for hemagglutination activity [1]. The sea urchin egg lectin (SUEL) forms ...	The D-galactoside binding lectin purified from sea urchin (Anthocidaris crassispina) eggs exists as a disulphide-linked homodimer of two subunits; the dimeric form is essential for hemagglutination activity [1]. The sea urchin egg lectin (SUEL) forms a new class of lectins that binds D-galactoside and L-rhamnose, with preference for L-rhamnose [1,2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	TIR domain-containing protein	molecular transducer activity signaling receptor activity	biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to external stimulus defense response to Gram-negative bacterium response to biotic stimulus defense response to bacterium response to bacterium response to stress response to external biotic stimulus cellular response to stimulus regulation of biological process regulation of cellular process biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to external stimulus defense response to Gram-negative bacterium response to biotic stimulus defense response to bacterium response to bacterium response to stress response to external biotic stimulus cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway signaling biological regulation cellular process signal transduction cell communication developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching anatomical structure development embryo development	-
E, F, G, H	Latrophilin-like protein 1	binding carbohydrate binding molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	proteolysis self proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation proteolysis self proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation signal transduction cell communication sexual reproduction reproductive process developmental process multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching anatomical structure development embryo development anterior/posterior pattern specification pattern specification process regionalization	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B, C, D	IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	Domain
A, B, C, D	IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Homologous Superfamily
A, B, C, D	IPR001611	Leucine-rich repeat	Repeat
A, B, C, D	IPR050541	Leucine-rich repeat and transmembrane domain-containing protein	Family
A, B, C, D	IPR003591	Leucine-rich repeat, typical subtype	Repeat
E, F, G, H	IPR001879	GPCR, family 2, extracellular hormone receptor domain	Domain
E, F, G, H	IPR048072	Latrophilin-like receptor, 7TM	Domain
E, F, G, H	IPR036445	GPCR family 2, extracellular hormone receptor domain superfamily	Homologous Superfamily
E, F, G, H	IPR000832	GPCR, family 2, secretin-like	Family
E, F, G, H	IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Homologous Superfamily
E, F, G, H	IPR032471	AGRL2-4 , GAIN subdomain A	Domain
E, F, G, H	IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	Domain
E, F, G, H	IPR000203	GPS motif	Conserved Site
E, F, G, H	IPR046338	GAIN domain superfamily	Homologous Superfamily
E, F, G, H	IPR057244	GAIN, subdomain B	Domain
E, F, G, H	IPR017981	GPCR, family 2-like, 7TM	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8SUF | pdb_00008suf

The complex of TOL-1 ectodomain bound to LAT-1 Lectin domain

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage