8TO9 | pdb_00008to9

Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae8to9A01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
CWD40e8to9C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
BWD40e8to9B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
De8to9D01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
EWD40e8to9E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
HWD40e8to9H1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
Fe8to9F01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
GWD40e8to9G1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
K [auth L]WD40e8to9L1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
Ie8to9I01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
L [auth Z]WD40e8to9Z1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
JWD40e8to9J1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
D, E, H
Fab TRNM-f*01, broadly neutralizing VH Human immunodeficiency virus 1, Macaca mulatta (Rhesus monkey) IGHV4S16*02, IGHJ4*01, IGHJ1*01, IGHJ3*01, IGHJ1*02 V-DOMAIN VH IG FAB-GAMMA-1_KAPPA IMGT (202621-0)
F,
G,
K [auth L]
Fab TRNM-f*01, broadly neutralizing V-KAPPA Human immunodeficiency virus 1, Macaca mulatta (Rhesus monkey) IGKV1-22*01, IGKJ4*01 V-DOMAIN V-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202621-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D, E, H
Heavy ChainIGHV4 -envelope glycoprotein gp120SAbDab (2026-06-05)
F,
G,
K [auth L]
Light ChainIGKV1 Kappaenvelope glycoprotein gp120SAbDab (2026-06-05)