OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Core histone-like | 8070531 | 3001387 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | Core histone-like | 8067130 | 3001387 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2B Superfamily | Core histone-like | 8067130 | 3001387 | SCOP2B (2022-06-29) |
D [auth H] | SCOP2B Superfamily | Core histone-like | 8066267 | 3001387 | SCOP2B (2022-06-29) |
H [auth D] | SCOP2B Superfamily | Core histone-like | 8066267 | 3001387 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | DNA-glycosylase | 8036319 | 3000905 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | TATA-box binding protein-like | 8036320 | 3000705 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth F], F [auth B] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
C [auth G], G [auth C] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
PF07934 | 8-oxoguanine DNA glycosylase, N-terminal domain (OGG_N) | 8-oxoguanine DNA glycosylase, N-terminal domain | - | Family | |
PF00730 | HhH-GPD superfamily base excision DNA repair protein (HhH-GPD) | HhH-GPD superfamily base excision DNA repair protein | This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonucle ... | Domain |