8WYR | pdb_00008wyr

Cryo-EM structure of human CD5L bound to IgM-Fc/J


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth M]Sigma70_r1_1e8wyrM01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Sigma70_r1_1ECOD (v295)
K [auth L]e8wyrL1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
J [auth K]e8wyrK1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
He8wyrH1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Ge8wyrG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Fe8wyrF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Ee8wyrE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
De8wyrD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Ce8wyrC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
Be8wyrB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF:ECOD (v295)
ASigma70_r1_1e8wyrA01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Sigma70_r1_1ECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
L [auth M]PF00530Scavenger receptor cysteine-rich domain (SRCR)Scavenger receptor cysteine-rich domainThese domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions. Domain
A,
B,
C,
D,
E,
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth M]Interleukin-2,CD5 antigen-like
I [auth J]Immunoglobulin J chain
A,
B,
C,
D,
E,
Interleukin-2,Isoform 1 of Immunoglobulin heavy constant mu

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
L [auth M]P60568
I [auth J]P01591
A,
B,
C,
D,
E,
P60568