Annotations: 8XON

Cryo-EM structure of the ClpC1:ClpP1P2 degradation complex in Streptomyces hawaiiensis

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
U [auth N]	WD40	e8xonN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
T [auth M]	WD40	e8xonM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
S [auth L]	WD40	e8xonL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
R [auth K]	WD40	e8xonK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
Q [auth J]	WD40	e8xonJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
P [auth I]	WD40	e8xonI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
O [auth H]		e8xonH01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
N [auth G]	WD40	e8xonG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
M [auth F]	WD40	e8xonF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
L [auth E]	WD40	e8xonE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
K [auth D]	WD40	e8xonD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
J [auth C]	WD40	e8xonC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
I [auth B]	WD40	e8xonB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
H [auth A]		e8xonA01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
F [auth T]	WD40	e8xonT1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E [auth O]	WD40	e8xonO1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D [auth P]	WD40	e8xonP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C [auth Q]	WD40	e8xonQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B [auth R]	WD40	e8xonR1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
A [auth S]		e8xonS01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	ATP-dependent Clp protease proteolytic subunit	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity ATP-dependent peptidase activity ATP-dependent activity ATPase binding protein binding binding enzyme binding	catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process protein quality control for misfolded or incompletely synthesized proteins macromolecule catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm endopeptidase Clp complex protein-containing complex catalytic complex
H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], M [auth F], N [auth G]	ATP-dependent Clp protease proteolytic subunit	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity ATP-dependent peptidase activity ATP-dependent activity ATPase binding protein binding binding enzyme binding	catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process protein quality control for misfolded or incompletely synthesized proteins macromolecule catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm endopeptidase Clp complex protein-containing complex catalytic complex
G [auth X]	casein	-	-	-
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	NDP-hexose 4-ketoreductase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	cellular response to stimulus cellular response to heat response to stimulus cellular response to stress response to stress response to heat response to abiotic stimulus cellular process response to temperature stimulus	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	IPR001907	ATP-dependent Clp protease proteolytic subunit	Family
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	IPR018215	ClpP, Ser active site	Active Site
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	IPR033135	ClpP, histidine active site	Active Site
O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], O [auth H], P [auth I], Q [auth J], R [auth K], S [auth L], T [auth M], U [auth N]	IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	Family
H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], M [auth F], N [auth G]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], M [auth F], N [auth G]	IPR001907	ATP-dependent Clp protease proteolytic subunit	Family
H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], M [auth F], N [auth G]	IPR033135	ClpP, histidine active site	Active Site
H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], H [auth A], I [auth B], J [auth C], K [auth D], L [auth E], M [auth F], N [auth G]	IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	Family
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR001270	ClpA/B family	Family
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR018368	ClpA/B, conserved site 1	Conserved Site
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR041546	ClpA/ClpB, AAA lid domain	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR004176	Clp, repeat (R) N-terminal domain	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR050130	ATP-dependent Clp protease/Chaperone ClpA/ClpB	Family
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR003593	AAA+ ATPase domain	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR003959	ATPase, AAA-type, core	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR001943	UVR domain	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR019489	Clp ATPase, C-terminal	Domain
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR036628	Clp, N-terminal domain superfamily	Homologous Superfamily
A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], A [auth S], B [auth R], C [auth Q], D [auth P], E [auth O], F [auth T]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

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8XON | pdb_00008xon

Cryo-EM structure of the ClpC1:ClpP1P2 degradation complex in Streptomyces hawaiiensis

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage