9A8T | pdb_00009a8t

Integrative spatiotemporal modeling of biomolecular processes: application to the assembly of the Nuclear Pore Complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AK, AN, AQ, AT, CU AK, AN, AQ, AT, CU, CX, DA, DD, FE, FH, FK, FN, HO, HR, HU, HX, JY, KB, KE, KH, MI, ML, MO, MR, OS, OV, OY, PB, RC, RF, RI, RL	Nup93_spoke_1_ir_core_1	structural molecule activity structural constituent of nuclear pore	cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway biological regulation positive regulation of intracellular signal transduction positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway SMAD protein signal transduction regulation of response to stimulus regulation of cell communication cellular process regulation of SMAD protein signal transduction positive regulation of SMAD protein signal transduction positive regulation of signaling cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization metabolic process macromolecule metabolic process membrane organization cellular component organization nucleus organization organelle organization nuclear envelope organization cellular component organization or biogenesis endomembrane system organization nuclear pore organization protein-containing complex organization pore complex assembly cellular component biogenesis nuclear pore complex assembly cellular component assembly protein-containing complex assembly establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane centrosome cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane centrosome microtubule organizing center cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex nuclear pore
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	SEH1_spoke_1_yc_inner_cr	structural molecule activity	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport mitotic metaphase chromosome alignment mitotic cell cycle metaphase chromosome alignment chromosome localization organelle localization mitotic sister chromatid segregation cell cycle chromosome segregation cell cycle process mitotic nuclear division attachment of spindle microtubules to kinetochore organelle fission attachment of mitotic spindle microtubules to kinetochore chromosome organization sister chromatid segregation nuclear division mitotic cell cycle process nuclear chromosome segregation cell division cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus establishment of protein localization protein transport intracellular protein localization cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport protein-containing complex localization positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication TORC1 signaling positive regulation of signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process negative regulation of cell communication negative regulation of TORC1 signaling negative regulation of TOR signaling negative regulation of cellular process negative regulation of response to stimulus negative regulation of signal transduction cellular response to amino acid starvation cellular response to starvation cellular response to stress response to stress response to amino acid starvation response to starvation	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm cytosol GATOR2 complex Seh1-associated complex vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	Nup37_spoke_1_yc_inner_cr	-	RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular process cell division cell cycle RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular process cell division cell cycle chromosome segregation cell cycle process establishment of protein localization protein transport intracellular protein localization cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	Nup160_spoke_1_yc_inner_cr	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of protein localization protein transport intracellular protein localization developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm cytosol
AH, BQ, BZ, CI, CR AH, BQ, BZ, CI, CR, EA, EJ, ES, FB, G, GK, GT, HC, HL, IU, JD, JM, JV, LE, LN, LW, MF, NO, NX, OG, OP, P, PY, QH, QQ, QZ, Y	Nup43_spoke_1_yc_inner_cr	-	RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular process cell division cell cycle RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular process cell division cell cycle chromosome segregation cell cycle process establishment of protein localization protein transport intracellular protein localization cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
AG, BP, BY, CH, CQ AG, BP, BY, CH, CQ, DZ, EI, ER, F, FA, GJ, GS, HB, HK, IT, JC, JL, JU, LD, LM, LV, ME, NN, NW, O, OF, OO, PX, QG, QP, QY, X	Nup85_spoke_1_yc_inner_cr	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome nuclear membrane organelle membrane cytoplasm cytosol cytoskeleton spindle microtubule cytoskeleton membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
AE, BN, BW, CF, CO AE, BN, BW, CF, CO, D, DX, EG, EP, EY, GH, GQ, GZ, HI, IR, JA, JJ, JS, LB, LK, LT, M, MC, NL, NU, OD, OM, PV, QE, QN, QW, V	SEC13_spoke_1_yc_inner_cr	structural molecule activity identical protein binding protein binding binding	regulation of localization cellular localization regulation of cellular process transport positive regulation of biological process positive regulation of ER to Golgi vesicle-mediated transport vesicle-mediated transport localization establishment of localization in cell positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport regulation of biological process regulation of ER to Golgi vesicle-mediated transport regulation of localization cellular localization regulation of cellular process transport positive regulation of biological process positive regulation of ER to Golgi vesicle-mediated transport vesicle-mediated transport localization establishment of localization in cell positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport regulation of biological process regulation of ER to Golgi vesicle-mediated transport regulation of transport biological regulation intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport regulation of vesicle-mediated transport establishment of localization positive regulation of transport regulation of cellular localization cellular process Golgi vesicle transport membrane organization vesicle budding from membrane cellular component organization vesicle organization organelle organization cellular component organization or biogenesis COPII-coated vesicle budding RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus positive regulation of cell communication positive regulation of signal transduction signaling regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction TOR signaling regulation of signaling regulation of TOR signaling positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling nucleocytoplasmic transport nuclear transport establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport positive regulation of TORC1 signaling regulation of TORC1 signaling TORC1 signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process negative regulation of cell communication negative regulation of TORC1 signaling negative regulation of TOR signaling negative regulation of cellular process negative regulation of response to stimulus negative regulation of signal transduction vesicle cargo loading COPII-coated vesicle cargo loading	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore extracellular exosome extracellular vesicle extracellular organelle extracellular region vesicle extracellular membrane-bounded organelle cytoplasm cytosol vesicle coat intracellular vesicle transport vesicle membrane membrane protein complex membrane coat bounding membrane of organelle vesicle membrane cytoplasmic vesicle ER to Golgi transport vesicle membrane coated vesicle transport vesicle membrane coated membrane COPII vesicle coat cytoplasmic vesicle membrane coated vesicle membrane COPII-coated ER to Golgi transport vesicle organelle membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen GATOR2 complex Seh1-associated complex organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome
AD, BM, BV, C, CE AD, BM, BV, C, CE, CN, DW, EF, EO, EX, GG, GP, GY, HH, IQ, IZ, JI, JR, L, LA, LJ, LS, MB, NK, NT, OC, OL, PU, QD, QM, QV, U	Nup96_spoke_1_yc_inner_cr	molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity transcription coactivator activity transcription regulator activity transcription coregulator activity peptidase activity serine hydrolase activity catalytic activity, acting on a protein serine-type peptidase activity hydrolase activity catalytic activity RNA binding binding molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity transcription coactivator activity transcription regulator activity transcription coregulator activity peptidase activity serine hydrolase activity catalytic activity, acting on a protein serine-type peptidase activity hydrolase activity catalytic activity RNA binding binding nucleic acid binding chromatin binding promoter-specific chromatin binding mRNA binding structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA export from nucleus nuclear export chromosome organization transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery pore complex assembly cellular component biogenesis nuclear pore complex assembly cellular component assembly protein-containing complex assembly proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process regulation of cellular process regulation of mRNA splicing, via spliceosome mRNA processing positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process RNA processing regulation of biological process positive regulation of mRNA metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of mRNA processing regulation of macromolecule biosynthetic process regulation of metabolic process positive regulation of mRNA splicing, via spliceosome positive regulation of biological process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of mRNA processing RNA splicing biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process RNA splicing, via transesterification reactions positive regulation of gene expression mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process positive regulation of RNA splicing	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen nucleoplasm nuclear pore nuclear basket inclusion body nuclear inclusion body ribonucleoprotein complex intracellular membraneless organelle nuclear body membraneless organelle nuclear pore cytoplasmic filaments
AC, B, BL, BU, CD AC, B, BL, BU, CD, CM, DV, EE, EN, EW, GF, GO, GX, HG, IP, IY, JH, JQ, K, KZ, LI, LR, MA, NJ, NS, OB, OK, PT, QC, QL, QU, T	Nup107_spoke_1_yc_inner_cr	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development nuclear pore organization protein-containing complex organization pore complex assembly cellular component biogenesis nuclear pore complex assembly nucleus organization cellular component assembly protein-containing complex assembly establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport gonad development reproductive system development reproductive process female gonad development sex differentiation female sex differentiation development of primary female sexual characteristics developmental process involved in reproduction development of primary sexual characteristics reproductive structure development	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome nuclear membrane organelle membrane cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen
AY, BB, BE, BH, DI AY, BB, BE, BH, DI, DL, DO, DR, FS, FV, FY, GB, IC, IF, II, IL, KM, KP, KS, KV, MW, MZ, NC, NF, PG, PJ, PM, PP, RQ, RT, RW, RZ	p62_spoke_1_ir_chan_1	Hsp90 protein binding protein binding binding heat shock protein binding SH2 domain binding protein domain specific binding chromatin binding PTB domain binding Hsp70 protein binding protein-folding chaperone binding ubiquitin binding ubiquitin-like protein binding phospholipid binding lipid binding Hsp90 protein binding protein binding binding heat shock protein binding SH2 domain binding protein domain specific binding chromatin binding PTB domain binding Hsp70 protein binding protein-folding chaperone binding ubiquitin binding ubiquitin-like protein binding phospholipid binding lipid binding structural molecule activity structural constituent of nuclear pore signaling receptor complex adaptor activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of response to stimulus regulation of cell communication regulation of canonical NF-kappaB signal transduction cellular process positive regulation of signaling RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport mitotic nuclear division mitotic metaphase chromosome alignment organelle fission chromosome organization sister chromatid segregation mitotic cell cycle metaphase chromosome alignment cellular component organization organelle organization nuclear division mitotic cell cycle process chromosome localization organelle localization nuclear chromosome segregation mitotic sister chromatid segregation cell cycle cellular component organization or biogenesis chromosome segregation cell cycle process negative regulation of signaling negative regulation of ERBB signaling pathway cell surface receptor protein tyrosine kinase signaling pathway negative regulation of cell communication regulation of epidermal growth factor receptor signaling pathway epidermal growth factor receptor signaling pathway enzyme-linked receptor protein signaling pathway regulation of ERBB signaling pathway cell surface receptor signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of epidermal growth factor receptor signaling pathway ERBB signaling pathway positive regulation of cell division cytoskeleton-dependent cytokinesis regulation of mitotic cytokinetic process positive regulation of mitotic cytokinesis mitotic cytokinetic process mitotic cytokinesis regulation of cell division regulation of mitotic cytokinesis positive regulation of cytokinesis positive regulation of mitotic cytokinetic process positive regulation of cell cycle process regulation of cell cycle regulation of cytokinesis regulation of cell cycle process cytokinesis regulation of cytokinetic process positive regulation of cell cycle cytokinetic process cell division small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction negative regulation of intracellular signal transduction regulation of Ras protein signal transduction Ras protein signal transduction negative regulation of small GTPase mediated signal transduction negative regulation of Ras protein signal transduction establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport positive regulation of ERBB signaling pathway positive regulation of epidermal growth factor receptor signaling pathway positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of mitotic nuclear division positive regulation of mitotic nuclear division regulation of mitotic cell cycle positive regulation of nuclear division regulation of organelle organization regulation of nuclear division RNA export from nucleus nuclear export regulation of cytoskeleton organization microtubule cytoskeleton organization regulation of mitotic spindle organization microtubule cytoskeleton organization involved in mitosis spindle organization regulation of microtubule-based process regulation of spindle organization mitotic spindle organization microtubule-based process cytoskeleton organization regulation of microtubule cytoskeleton organization centriole assembly microtubule organizing center organization organelle assembly membraneless organelle assembly cellular component biogenesis cellular component assembly negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation centrosome cycle positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process centrosome duplication regulation of centriole replication centriole replication positive regulation of cellular component biogenesis regulation of centrosome cycle positive regulation of cytoskeleton organization regulation of cellular component biogenesis regulation of organelle assembly regulation of centrosome duplication positive regulation of centriole replication positive regulation of organelle assembly protein localization to microtubule cytoskeleton regulation of localization regulation of protein localization regulation of protein localization to centrosome protein localization to microtubule organizing center protein localization to cytoskeleton positive regulation of protein localization positive regulation of protein localization to centrosome protein localization to centrosome centrosome separation mitotic centrosome separation	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton membrane-bounded organelle organelle envelope nuclear envelope nucleus intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton membrane-bounded organelle organelle envelope nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel centrosome microtubule organizing center cytoplasm mitotic spindle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen Flemming body midbody ribonucleoprotein complex
AX, BA, BD, BG, DH AX, BA, BD, BG, DH, DK, DN, DQ, FR, FU, FX, GA, IB, IE, IH, IK, KL, KO, KR, KU, MV, MY, NB, NE, PF, PI, PL, PO, RP, RS, RV, RY	p58_spoke_1_ir_chan_1	protein-containing complex binding binding structural molecule activity structural constituent of nuclear pore identical protein binding protein binding	localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization regulation of localization establishment of protein localization regulation of cellular process regulation of protein localization regulation of protein localization to nucleus localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization regulation of localization establishment of protein localization regulation of cellular process regulation of protein localization regulation of protein localization to nucleus import into nucleus regulation of protein import into nucleus protein import into nucleus intracellular protein localization regulation of intracellular transport regulation of biological process regulation of transport biological regulation regulation of establishment of protein localization regulation of nucleocytoplasmic transport protein localization to nucleus regulation of protein transport establishment of protein localization to organelle protein transport regulation of cellular localization macromolecule localization protein localization to organelle regulation of intracellular protein transport intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear membrane membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
AW, AZ, BC, BF, DG AW, AZ, BC, BF, DG, DJ, DM, DP, FQ, FT, FW, FZ, IA, ID, IG, IJ, KK, KN, KQ, KT, MU, MX, NA, ND, PE, PH, PK, PN, RO, RR, RU, RX	p54_spoke_1_ir_chan_1	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope protein localization to organelle macromolecule localization intracellular protein localization protein localization to nuclear inner membrane establishment of protein localization NLS-bearing protein import into nucleus import into nucleus establishment of protein localization to organelle protein transport protein import into nucleus intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel
AO, AU, CY, DE, FI AO, AU, CY, DE, FI, FO, HS, HY, KC, KI, MM, MS, OW, PC, RG, RM	Nup188_spoke_1_ir_core_2	structural molecule activity structural constituent of nuclear pore	RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular localization nucleocytoplasmic transport nuclear transport RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA export from nucleus nuclear export	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear pore inner ring protein-containing complex nuclear protein-containing complex cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore cytoplasm cytosol
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	Nup155_spoke_1_ir_core_1	structural molecule activity structural constituent of nuclear pore	membrane organization cellular component organization nucleus organization organelle organization nuclear envelope organization cellular process cellular component organization or biogenesis endomembrane system organization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization membrane organization cellular component organization nucleus organization organelle organization nuclear envelope organization cellular process cellular component organization or biogenesis endomembrane system organization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport chromosome organization transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope protein localization to organelle intracellular protein localization protein localization to nuclear inner membrane establishment of protein localization import into nucleus establishment of protein localization to organelle protein transport protein import into nucleus intracellular protein transport RNA export from nucleus nuclear export	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane nuclear pore inner ring cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore cytoplasm cytosol
AL, AR, CV, DB, FF AL, AR, CV, DB, FF, FL, HP, HV, JZ, KF, MJ, MP, OT, OZ, RD, RJ	Nup205_spoke_1_ir_core_1	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of protein localization protein transport intracellular protein localization cellular localization nucleocytoplasmic transport nuclear transport establishment of localization in cell intracellular transport pore complex assembly cellular component biogenesis nuclear pore complex assembly cellular component assembly protein-containing complex assembly	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane nuclear pore inner ring cellular anatomical structure membrane membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane organelle membrane nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen
A, AB, BK, BT, CC A, AB, BK, BT, CC, CL, DU, ED, EM, EV, GE, GN, GW, HF, IO, IX, J, JG, JP, KY, LH, LQ, LZ, NI, NR, OA, OJ, PS, QB, QK, QT, S	Nup133_spoke_1_yc_inner_cr	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization metabolic process macromolecule metabolic process chromosome organization transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery developmental process multicellular organism development multicellular organismal process anatomical structure development animal organ development nephron development animal gross anatomical part developmental process kidney development renal system development system development establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane intracellular membraneless organelle chromosome chromosomal region kinetochore membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome nuclear membrane organelle membrane cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AK, AN, AQ, AT, CU AK, AN, AQ, AT, CU, CX, DA, DD, FE, FH, FK, FN, HO, HR, HU, HX, JY, KB, KE, KH, MI, ML, MO, MR, OS, OV, OY, PB, RC, RF, RI, RL	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	IPR037363	Sec13/Seh1 family	Family
AF, BO, BX, CG, CP AF, BO, BX, CG, CP, DY, E, EH, EQ, EZ, GI, GR, HA, HJ, IS, JB, JK, JT, LC, LL, LU, MD, N, NM, NV, OE, ON, PW, QF, QO, QX, W	IPR001680	WD40 repeat	Repeat
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	IPR019775	WD40 repeat, conserved site	Conserved Site
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	IPR037626	Nucleoporin Nup37	Family
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	IPR001680	WD40 repeat	Repeat
AA, AJ, BS, CB, CK AA, AJ, BS, CB, CK, CT, EC, EL, EU, FD, GM, GV, HE, HN, I, IW, JF, JO, JX, LG, LP, LY, MH, NQ, NZ, OI, OR, QA, QJ, QS, R, RB	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	IPR021717	Nucleoporin Nup120/160	Family
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	IPR056547	NUP160, helical domain	Domain
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	IPR056535	NUP160, middle TPR domain	Domain
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	IPR059141	Nucleoporin Nup120/160, beta-propeller domain	Domain
AI, BR, CA, CJ, CS AI, BR, CA, CJ, CS, EB, EK, ET, FC, GL, GU, H, HD, HM, IV, JE, JN, JW, LF, LO, LX, MG, NP, NY, OH, OQ, PZ, Q, QI, QR, RA, Z	IPR056536	NUP160, C-terminal TPR domain	Domain
AH, BQ, BZ, CI, CR AH, BQ, BZ, CI, CR, EA, EJ, ES, FB, G, GK, GT, HC, HL, IU, JD, JM, JV, LE, LN, LW, MF, NO, NX, OG, OP, P, PY, QH, QQ, QZ, Y	IPR019775	WD40 repeat, conserved site	Conserved Site
AH, BQ, BZ, CI, CR AH, BQ, BZ, CI, CR, EA, EJ, ES, FB, G, GK, GT, HC, HL, IU, JD, JM, JV, LE, LN, LW, MF, NO, NX, OG, OP, P, PY, QH, QQ, QZ, Y	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
AH, BQ, BZ, CI, CR AH, BQ, BZ, CI, CR, EA, EJ, ES, FB, G, GK, GT, HC, HL, IU, JD, JM, JV, LE, LN, LW, MF, NO, NX, OG, OP, P, PY, QH, QQ, QZ, Y	IPR001680	WD40 repeat	Repeat
AH, BQ, BZ, CI, CR AH, BQ, BZ, CI, CR, EA, EJ, ES, FB, G, GK, GT, HC, HL, IU, JD, JM, JV, LE, LN, LW, MF, NO, NX, OG, OP, P, PY, QH, QQ, QZ, Y	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AG, BP, BY, CH, CQ AG, BP, BY, CH, CQ, DZ, EI, ER, F, FA, GJ, GS, HB, HK, IT, JC, JL, JU, LD, LM, LV, ME, NN, NW, O, OF, OO, PX, QG, QP, QY, X	IPR011502	Nucleoporin Nup85-like	Family
AE, BN, BW, CF, CO AE, BN, BW, CF, CO, D, DX, EG, EP, EY, GH, GQ, GZ, HI, IR, JA, JJ, JS, LB, LK, LT, M, MC, NL, NU, OD, OM, PV, QE, QN, QW, V	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AE, BN, BW, CF, CO AE, BN, BW, CF, CO, D, DX, EG, EP, EY, GH, GQ, GZ, HI, IR, JA, JJ, JS, LB, LK, LT, M, MC, NL, NU, OD, OM, PV, QE, QN, QW, V	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
AE, BN, BW, CF, CO AE, BN, BW, CF, CO, D, DX, EG, EP, EY, GH, GQ, GZ, HI, IR, JA, JJ, JS, LB, LK, LT, M, MC, NL, NU, OD, OM, PV, QE, QN, QW, V	IPR037363	Sec13/Seh1 family	Family
AE, BN, BW, CF, CO AE, BN, BW, CF, CO, D, DX, EG, EP, EY, GH, GQ, GZ, HI, IR, JA, JJ, JS, LB, LK, LT, M, MC, NL, NU, OD, OM, PV, QE, QN, QW, V	IPR001680	WD40 repeat	Repeat
AD, BM, BV, C, CE AD, BM, BV, C, CE, CN, DW, EF, EO, EX, GG, GP, GY, HH, IQ, IZ, JI, JR, L, LA, LJ, LS, MB, NK, NT, OC, OL, PU, QD, QM, QV, U	IPR037665	Nucleoporin peptidase S59-like	Family
AD, BM, BV, C, CE AD, BM, BV, C, CE, CN, DW, EF, EO, EX, GG, GP, GY, HH, IQ, IZ, JI, JR, L, LA, LJ, LS, MB, NK, NT, OC, OL, PU, QD, QM, QV, U	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
AD, BM, BV, C, CE AD, BM, BV, C, CE, CN, DW, EF, EO, EX, GG, GP, GY, HH, IQ, IZ, JI, JR, L, LA, LJ, LS, MB, NK, NT, OC, OL, PU, QD, QM, QV, U	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
AD, BM, BV, C, CE AD, BM, BV, C, CE, CN, DW, EF, EO, EX, GG, GP, GY, HH, IQ, IZ, JI, JR, L, LA, LJ, LS, MB, NK, NT, OC, OL, PU, QD, QM, QV, U	IPR021967	Nuclear pore complex protein NUP96, C-terminal domain	Domain
AC, B, BL, BU, CD AC, B, BL, BU, CD, CM, DV, EE, EN, EW, GF, GO, GX, HG, IP, IY, JH, JQ, K, KZ, LI, LR, MA, NJ, NS, OB, OK, PT, QC, QL, QU, T	IPR007252	Nuclear pore protein 84/107	Family
AY, BB, BE, BH, DI AY, BB, BE, BH, DI, DL, DO, DR, FS, FV, FY, GB, IC, IF, II, IL, KM, KP, KS, KV, MW, MZ, NC, NF, PG, PJ, PM, PP, RQ, RT, RW, RZ	IPR007758	Nucleoporin, NSP1-like, C-terminal	Domain
AY, BB, BE, BH, DI AY, BB, BE, BH, DI, DL, DO, DR, FS, FV, FY, GB, IC, IF, II, IL, KM, KP, KS, KV, MW, MZ, NC, NF, PG, PJ, PM, PP, RQ, RT, RW, RZ	IPR026010	Nucleoporin NSP1/NUP62	Family
AX, BA, BD, BG, DH AX, BA, BD, BG, DH, DK, DN, DQ, FR, FU, FX, GA, IB, IE, IH, IK, KL, KO, KR, KU, MV, MY, NB, NE, PF, PI, PL, PO, RP, RS, RV, RY	IPR024882	Nucleoporin p58/p45/NUP49	Family
AW, AZ, BC, BF, DG AW, AZ, BC, BF, DG, DJ, DM, DP, FQ, FT, FW, FZ, IA, ID, IG, IJ, KK, KN, KQ, KT, MU, MX, NA, ND, PE, PH, PK, PN, RO, RR, RU, RX	IPR025712	Nucleoporin Nup54, alpha-helical domain	Domain
AW, AZ, BC, BF, DG AW, AZ, BC, BF, DG, DJ, DM, DP, FQ, FT, FW, FZ, IA, ID, IG, IJ, KK, KN, KQ, KT, MU, MX, NA, ND, PE, PH, PK, PN, RO, RR, RU, RX	IPR040985	Nup54, C-terminal interacting domain	Domain
AW, AZ, BC, BF, DG AW, AZ, BC, BF, DG, DJ, DM, DP, FQ, FT, FW, FZ, IA, ID, IG, IJ, KK, KN, KQ, KT, MU, MX, NA, ND, PE, PH, PK, PN, RO, RR, RU, RX	IPR024864	Nucleoporin Nup54/Nup57/Nup44	Family
AO, AU, CY, DE, FI AO, AU, CY, DE, FI, FO, HS, HY, KC, KI, MM, MS, OW, PC, RG, RM	IPR016024	Armadillo-type fold	Homologous Superfamily
AO, AU, CY, DE, FI AO, AU, CY, DE, FI, FO, HS, HY, KC, KI, MM, MS, OW, PC, RG, RM	IPR044840	Nucleoporin Nup188	Family
AO, AU, CY, DE, FI AO, AU, CY, DE, FI, FO, HS, HY, KC, KI, MM, MS, OW, PC, RG, RM	IPR048883	Nucleoporin Nup188, N-terminal subdomain III	Domain
AO, AU, CY, DE, FI AO, AU, CY, DE, FI, FO, HS, HY, KC, KI, MM, MS, OW, PC, RG, RM	IPR018864	Nucleoporin Nup188, N-terminal	Domain
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2	Homologous Superfamily
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1	Homologous Superfamily
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3	Homologous Superfamily
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR004870	Nucleoporin, Nup155-like	Family
AM, AP, AS, AV, BI AM, AP, AS, AV, BI, BJ, CW, CZ, DC, DF, DS, DT, FG, FJ, FM, FP, GC, GD, HQ, HT, HW, HZ, IM, IN, KA, KD, KG, KJ, KW, KX, MK, MN, MQ, MT, NG, NH, OU, OX, PA, PD, PQ, PR, RE, RH, RK, RN, SA, SB	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
AL, AR, CV, DB, FF AL, AR, CV, DB, FF, FL, HP, HV, JZ, KF, MJ, MP, OT, OZ, RD, RJ	IPR021827	Nucleoporin Nup186/Nup192/Nup205	Family
A, AB, BK, BT, CC A, AB, BK, BT, CC, CL, DU, ED, EM, EV, GE, GN, GW, HF, IO, IX, J, JG, JP, KY, LH, LQ, LZ, NI, NR, OA, OJ, PS, QB, QK, QT, S	IPR037624	Nuclear pore complex protein Nup133-like	Family
A, AB, BK, BT, CC A, AB, BK, BT, CC, CL, DU, ED, EM, EV, GE, GN, GW, HF, IO, IX, J, JG, JP, KY, LH, LQ, LZ, NI, NR, OA, OJ, PS, QB, QK, QT, S	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A, AB, BK, BT, CC A, AB, BK, BT, CC, CL, DU, ED, EM, EV, GE, GN, GW, HF, IO, IX, J, JG, JP, KY, LH, LQ, LZ, NI, NR, OA, OJ, PS, QB, QK, QT, S	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.