Annotations: 9AYS

 9AYS

HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with V5, gp120-Interface, and Anti-Immune Complex pAbs from Rh.33203


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B Superfamilygp120 core 8080371 3001390 SCOP2B (2022-06-29)
E [auth C]SCOP2B Superfamilygp120 core 8080371 3001390 SCOP2B (2022-06-29)
G [auth E]SCOP2B Superfamilygp120 core 8080371 3001390 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyVirus ectodomain 8085614 3001628 SCOP2B (2022-06-29)
F [auth D]SCOP2B SuperfamilyVirus ectodomain 8085614 3001628 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyVirus ectodomain 8085614 3001628 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A],
E [auth C],
G [auth E]
PF00516Envelope glycoprotein GP120 (GP120)Envelope glycoprotein GP120The envelope glycoprotein Gp160 of HIV1 is cleaved into the surface protein Gp120 and the transmembrane protein Gp41. The entry of HIV requires interaction of viral GP120 with the CD4 glycoprotein (Swiss:P01730) and a chemokine receptor on the cell s ...Domain
D [auth B],
F [auth D],
H [auth F]
PF00517Retroviral envelope protein (GP41)Retroviral envelope protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]NHP gp120-Interface Epitope pAb - Predicted Heavy Chain---
B [auth L]NHP gp120-Interface Epitope pAb - Predicted Light Chain---
C [auth A],
E [auth C],
G [auth E]
Surface protein gp120
D [auth B],
F [auth D],
H [auth F]
Transmembrane protein gp41
I [auth G]NHP V5 Epitope pAb - Predicted Light Chain---
J [auth I]NHP V5 Epitope pAb - Predicted Heavy Chain---
K [auth J]NHP Anti-Immune Complex pAb - Predicted Heavy Chain---
L [auth K]NHP Anti-Immune Complex pAb - Predicted Light Chain---