9C86 | pdb_00009c86

Structure of endogenous asymmetric DPYSL2 from rat model of Alzheimer's disease

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth B]WD40e9c86B2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
C [auth A]WD40e9c86A2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
B [auth D]WD40e9c86D2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
A [auth C]WD40e9c86C2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C],
B [auth D],
C [auth A],
D [auth B]		PF01979Amidohydrolase family (Amidohydro_1)Amidohydrolase familyThis family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ...This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
B [auth D],
C [auth A],
D [auth B]		Dihydropyrimidinase-related protein 2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C],
B [auth D],
C [auth A],
D [auth B]		IPR006680Amidohydrolase-relatedDomain
A [auth C],
B [auth D],
C [auth A],
D [auth B]		IPR032466Metal-dependent hydrolaseHomologous Superfamily
A [auth C],
B [auth D],
C [auth A],
D [auth B]		IPR050378Metallo-dependent Hydrolases SuperfamilyFamily
A [auth C],
B [auth D],
C [auth A],
D [auth B]		IPR011059Metal-dependent hydrolase, composite domain superfamilyHomologous Superfamily
A [auth C],
B [auth D],
C [auth A],
D [auth B]		IPR011778Hydantoinase/dihydropyrimidinaseFamily